Complete genome sequence of a novel secovirid infecting cassava in the Americas
We report the complete genome sequence of a field isolate of a novel bipartite secovirid infecting cassava in Colombia, provisionally named "cassava torrado-like virus" (CsTLV). The genome sequence was obtained using Oxford Nanopore Technology, and the 5’ ends were confirmed by RACE. The RNA1 is 7252 nucleotides (nt) long, encoding a polyprotein of 2336 amino acids (aa) containing the typical “replication block”, conserved torradovirus motifs, and a Maf/Ham1 domain, which is not commonly found in viral genomes. The RNA2 is 4469 nt long and contains two overlapping ORFs encoding proteins of 226 and 1179 aa, showing the characteristic genome arrangement of members of the genus Torradovirus.
Saved in:
| Main Authors: | , , , , |
|---|---|
| Format: | Journal Article biblioteca |
| Language: | English |
| Published: |
Springer
2022-02
|
| Subjects: | secoviridae, genomes, infectious diseases, disease transmission, genomas, enfermedades infecciosas, transmisión de enfermedades, |
| Online Access: | https://hdl.handle.net/10568/120939 https://doi.org/10.1007/s00705-021-05325-2 |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|