Data from: Tripal EUtils - A Tripal module to increase exchange and reuse of genome assembly metadata
<p>A core component of NCBI’s BioSample metadata are the BioSample “packages” (<a href="https://www.ncbi.nlm.nih.gov/biosample/docs/packages/">https://www.ncbi.nlm.nih.gov/biosample/docs/packages/</a>). Data submitters can choose a package, which contain a variety of attribute sets, such as plant- or insect-specific attributes, attribute values as recommended by the MIxS standard, etc. Here, we provide suggested ontology term mappings for attributes from the Invertebrate 1.0 and Plant 1.0 packages (<a href="https://www.ncbi.nlm.nih.gov/biosample/docs/packages/Invertebrate.1.0/">https://www.ncbi.nlm.nih.gov/biosample/docs/packages/Invertebrate.1.0/</a>, <a href="https://www.ncbi.nlm.nih.gov/biosample/docs/packages/Plant.1.0/">https://www.ncbi.nlm.nih.gov/biosample/docs/packages/Plant.1.0/</a>). This dataset corresponds to Table 4 in the corresponding publication in the journal <em>Database</em>. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Ontology term mapping from: Tripal EUtils - A Tripal module to increase exchange and reuse of genome assembly metadata.</p> <p>File Name: Table4-ontology-mappings.csv</p><p>Resource Description: Proposed property mappings from the NCBI BioSample attribute packages for invertebrates and plants to ontology terms. Where no ontology terms were found, fields are left blank. </p></li><br><li><p>Resource Title: Data dictionary for Ontology term mapping.</p> <p>File Name: data_dictionary.csv</p></li></ul><p></p>
| Main Authors: | , , , , , , |
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| Format: | Dataset biblioteca |
| Published: |
2019
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| Subjects: | Genomics and transcriptomics, Genetics, Tripal, Chado, NCBI, metadata, metadata map, BioSample, |
| Online Access: | https://figshare.com/articles/dataset/Data_from_Tripal_EUtils_-_A_Tripal_module_to_increase_exchange_and_reuse_of_genome_assembly_metadata/24853395 |
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