ESTtik, a semi-automatic cDNA sequence analysis and annotation pipeline including SSR and SNP search tools

by Argout, Xavier, Ruiz, Manuel, Fouet, Olivier, Lanaud, Claire, Wincker, Patrick, Da Silva, Corinne, Courtois, Brigitte

Monitoring the banana response to infection by Mycosphaerella fijiensis : N76

by Carreel, Françoise, Da Silva, Corinne, Labadie, Karine, Souquet, Marlène, Habas, Rémy, Pignolet, Luc, Zapater, Marie-Françoise, Yahiaoui, Nabila

Genome sequencing project has begun on two plant trypanosomatids (Phytomonas)

by Dollet, Michel, Couloux, Arnaud, Noël, Benjamin, Aury, Jean-Marc, Jaillon, Olivier, Fabre, Sandrine, Da Silva, Corinne, Artiguenave, Françoise, Poulain, Julie, Wincker, Patrick

Current status of the sequencing project on two plant trypanosomatids (Phytomonas spp.)

by Dollet, Michel, Couloux, Arnaud, Noël, Benjamin, Aury, Jean-Marc, Jaillon, Olivier, Fabre, Sandrine, Da Silva, Corinne, Artiguenave, Françoise, Poulain, Julie, Wincker, Patrick

Genetic identification and characterisation of new microsatellite markers derived from expressed tag sequences (est) in Theobroma cacao L.

by Lanaud, Claire, Argout, Xavier, Fouet, Olivier, Jeanneau, Mélanie, Loor, Rey Gaston, N'Goran, Jeanne A.K., Lemainque, Arnaud, Legavre, Thierry, Sabau, Xavier, Wincker, Patrick, Da Silva, Corinne, Gramacho, Karina Peres, Risterucci, Ange-Marie

Preliminary results on linalool synthase expression during seed development and fermentation of Nacional and Trinitario clones

by Sabau, Xavier, Loor, Rey Gaston, Boccara, Martine, Fouet, Olivier, Jeanneau, Mélanie, Argout, Xavier, Legavre, Thierry, Risterucci, Ange-Marie, Wincker, Patrick, Da Silva, Corinne, Jimenez, Juan Carlos, Cros, Emile, Boulanger, Renaud, Alary, Remy, Lanaud, Claire

Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean

by Delmont, Tom O., Gaia, Morgan, Hinsinger, Damien D., Frémont, Paul, Vanni, Chiara, Fernández-Guerra, Antonio, Eren, A. Murat, Kourlaiev, Artem, d'Agata, Leo, Clayssen, Quentin, Villar, Emilie, Labadie, Karine, Cruaud, Corinne, Poulain, Julie, Da Silva, Corinne, Wessner, Marc, Noel, Benjamin, Aury, Jean‐Marc, Tara Oceans Coordinators, Acinas, Silvia G.
Published 2022-05

Obtaining the full sequence of the genome of two plants trypanosomatids

by Dollet, Michel, Fabre, Sandrine, Wincker, Patrick, Porcel, Benoit, Noël, Benjamin, Denoeud, France, Jabbari, Kamel, Aury, Jean-Marc, Da Silva, Corinne, Couloux, Arnaud, Poulain, Julie, Bringaud, Frédéric, Campbell, David A., Cintron, Roxana, Dickens, Nicolas, Docampo, Roberto, Field, Mark, Hammarton, Tansy, Koumandou, Lila, Matthews, Keith, Mottram, Jeremy, Michaeli, Shula, Opperdoes, Fred, Szoor, Balazs, Sturm, Nancy R., Zilberstein, Dan

A first step in the understanding of the cocoa transcriptome: Analysis of an exhaustive dataset of ESTs on Theobroma cacao generated from various tissues and under various conditio...

by Argout, Xavier, Fouet, Olivier, Wincker, Patrick, Gramacho, Karina Peres, Legavre, Thierry, Sabau, Xavier, Risterucci, Ange-Marie, Da Silva, Corinne, Loor Solorzano, Rey Gaston, Cascardo, Julio Cezar M., Courtois, Brigitte, Kuhn, David N., Schnell, Rey J., Babin, Régis, Sounigo, Olivier, Ducamp, Michel, Verica, Joseph, Guiltinan, Mark J., Alemanno, Laurence, Machado, Regina, Phillips, Wilbert, Maximova, Siela N., Lanaud, Claire

The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release

by Lesur, Isabelle, Le Provost, Grégoire, Bento, Pascal, Da Silva, Corinne, Leplé, Jean-Charles, Murat, Florent, Ueno, Saneyoshi, Bartholomé, Jérôme, Lalanne, Céline, Ehrenmann, François, Noirot, Céline, Burban, Benoit, Léger, Valérie, Amselem, Joelle, Belser, Caroline, Quesneville, Hadi, Stierschneider, Michael, Fluch, Silvia, Feldhahn, Lasse, Tarkka, Mika, Herrmann, Sylvie, Buscot, François, Klopp, Christophe, Kremer, Antoine, Salse, Jérôme, Aury, Jean-Marc, Plomion, Christophe

The streamlined genome of Phytomonas spp. relative to human pathogenic kinetoplastids reveals a parasite tailored for plants

by Porcel, Betina M., Denoeud, France, Opperdoes, Fred, Noël, Benjamin, Madoui, Mohammed-Amine, Hammarton, Tansy, Field, Mark, Da Silva, Corinne, Couloux, Arnaud, Poulain, Julie, Katinka, Michael, Jabbari, Kamel, Aury, Jean-Marc, Campbell, David A., Cintron, Roxana, Dickens, Nicolas, Docampo, Roberto, Sturm, Nancy R., Koumandou, Lila, Fabre, Sandrine, Flegontov, Pavel, Lukes, Julius, Michaeli, Shula, Mottram, Jeremy, Szoor, Balazs, Zilberstein, Dan, Bringaud, Frédéric, Wincker, Patrick, Dollet, Michel

A large EST resource for theobroma cacao L.

by Lanaud, Claire, Fouet, Olivier, Gramacho, Karina Peres, Argout, Xavier, Legavre, Thierry, Sabau, Xavier, Risterucci, Ange-Marie, Wincker, Patrick, Da Silva, Corinne, Loor Solorzano, Rey Gaston, Cascardo, Julio Cezar M., Courtois, Brigitte, Kuhn, David N., Schnell, Rey J., Babin, Régis, Sounigo, Olivier, Ducamp, Michel, Deberdt, Peninna, Verica, Joseph, Guiltinan, Mark J., Alemanno, Laurence, Machado, Regina, Philips, Wilbert, Maximova, Siela N., Rosenquist, Eric, Gilmour, Martin, Glaszmann, Jean-Christophe

Towards the understanding of the cocoa transcriptome: Production and analysis of an exhaustive dataset of ESTs of Theobroma cacao L. generated from various tissues and under variou...

by Argout, Xavier, Fouet, Olivier, Wincker, Patrick, Gramacho, Karina Peres, Legavre, Thierry, Sabau, Xavier, Risterucci, Ange-Marie, Da Silva, Corinne, Cascardo, Julio Cezar M., Allègre, Mathilde, Kuhn, David N., Verica, Joseph, Courtois, Brigitte, Loor, Rey Gaston, Babin, Régis, Sounigo, Olivier, Ducamp, Michel, Guiltinan, Mark J., Ruiz, Manuel, Alemanno, Laurence, Machado, Regina, Phillips, Wilbert, Schnell, Raymond J., Gilmour, Martin, Rosenquist, Eric, Butler, David R., Maximova, Siela N., Lanaud, Claire

A large est resource for Theobroma cacao including cDNAS isolated from various organs and under various biotic and abiotic stresses

by Lanaud, Claire, Fouet, Olivier, Gramacho, Karina Peres, Argout, Xavier, Legavre, Thierry, Sabau, Xavier, Risterucci, Ange-Marie, Wincker, Patrick, Da Silva, Corinne, Loor, Rey Gaston, Lopes, Uilson Vanderlei, Cascardo, Julio Cezar M., Courtois, Brigitte, Kuhn, David N., Schnell, Raymond J., Bailey, Bryan, Babin, Régis, Sounigo, Olivier, Ducamp, Michel, Paulin, Didier, Deberdt, Peninna, Verica, Joseph, Guiltinan, Mark J., Alemanno, Laurence, Machado, Regina, Phillips, Wilbert, Micheli, Fabienne, Da Silva Gesteira, Abelmon, Clément, Didier, Maximova, Siela N., Boccara, Michel, Butler, David R., Rosenquist, Eric, Gilmour, Martin, Glaszmann, Jean-Christophe

The banana (Musa acuminata) genome and the evolution of monocotyledonous plants

by D'Hont, Angélique, Denoeud, France, Aury, Jean-Marc, Baurens, Franc-Christophe, Carreel, Françoise, Garsmeur, Olivier, Noël, Benjamin, Bocs, Stéphanie, Droc, Gaëtan, Rouard, Mathieu, Da Silva, Corinne, Jabbari, Kamel, Cardi, Céline, Poulain, Julie, Souquet, Marlène, Labadie, Karine, Jourda, Cyril, Lengellé, Juliette, Rodier-Goud, Marguerite, Alberti, Adriana, Bernard, Maria, Correa, Margot, Ayyampalayam, Saravanaraj, Mckain, Michael R, Leebens-Mack, Jim, Burgess, Diane, Freeling, Mike, Mbéguié-A-Mbéguié, Didier, Chabannes, Matthieu, Wicker, Thomas, Panaud, Olivier, Barbosa, Jose, Hribova, Eva, Heslop Harrison, Pat, Habas, Rémy, Rivallan, Ronan, François, Philippe, Poiron, Claire, Kilian, Andrzej, Burthia, Dheema, Jenny, Christophe, Bakry, Frédéric, Brown, Spencer, Guignon, Valentin, Kema, Gert H.J., Dita, Miguel A., Waalwijk, Cees, Joseph, Steeve, Diévart, Anne, Jaillon, Olivier, Leclercq, Julie, Argout, Xavier, Lyons, Eric, Almeida, Ana, Jeridi, Mouna, Dolezel, Jaroslav, Roux, Nicolas, Risterucci, Ange-Marie, Weissenbach, Jean, Ruiz, Manuel, Glaszmann, Jean-Christophe, Quetier, Francis, Yahiaoui, Nabila, Wincker, Patrick

The coffee genome provides insight into the convergent evolution of caffeine biosynthesis

by Denoeud, France, Carretero-Paulet, Lorenzo, Dereeper, Alexis, Droc, Gaëtan, Guyot, Romain, Pietrella, Marco, Chunfang Zheng, Alberti, Adriana, Anthony, François, Aprea, Giuseppe, Aury, Jean-Marc, Bento, Pascal, Bernard, Maria, Bocs, Stéphanie, Campa, Claudine, Cenci, Alberto, Combes, Marie-Christine, Crouzillat, Dominique, Da Silva, Corinne, Daddiego, Loretta, De Bellis, Fabien, Dussert, Stéphane, Garsmeur, Olivier, Gayraud, Thomas, Guignon, Valentin, Jahn, Katharina, Jamilloux, Véronique, Joët, Thierry, Labadie, Karine, Tianying Lan, Leclercq, Julie, Lepelley, Maud, Leroy, Thierry, Lei-Ting Li, Librado, Pablo, Lopez, Loredana, Muñoz, Adriana, Noël, Benjamin, Pallavicini, Alberto, Perrotta, Gaetano, Poncet, Valérie, Pot, David, Priyono, Rigoreau, Michel, Rouard, Mathieu, Rozas, Julio, Tranchant-Dubreuil, Christine, VanBuren, Robert, Qiong Zhang, Andrade, Alan A., Argout, Xavier, Bertrand, Benoît, De Kochko, Alexandre, Graziosi, Giorgio, Henry, Robert, Jayarama, Ming, Ray, Nagai, Chifumi, Rounsley, Steve, Sankoff, David, Giuliano, Giovanni, Albert, Victor A., Wincker, Patrick, Lashermes, Philippe

Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems

by Caputi, Luigi, Carradec, Quentin, Eveillard, Damien, Kirilovsky, Amos, Pelletier, Eric, Pierella Karlusich, Juan J., Rocha Jimenez Vieira, Fabio, Villar, Emilie, Chaffron, Samuel, Malviya, Shruti, Scalco, Eleonora, Acinas, Silvia G., Alberti, Adriana, Aury, Jean‐Marc, Benoiston, Anne‐Sophie, Bertrand, Alexis, Biard, Tristan, Bittner, Lucie, Boccara, Martine, Brum, Jennifer R., Brunet, Christophe, Busseni, Greta, Carratalà, Anna, Claustre, Hervé, Coelho, Luis Pedro, Colin, Sebastien, D'Aniello, Salvatore, Da Silva, Corinne, Del Core, Marianna, Doré, Hugo, Gasparini, Stéphane, Kokoszka, Florian, Jamet, Jean‐Louis, Lejeusne, Christophe, Lepoivre, Cyrille, Lescot, Magali, Lima-Mendez, Gipsi, Lombard, Fabien, Lukeš, Julius, Maillet, Nicolas, Madoui, Mohammed‐Amin, Martinez, Elodie, Mazzocchi, M. G., Néou, Mario B., Paz‐Yepes, Javier, Poulain, Julie, Ramondenc, Simon, Romagnan, Jean-Baptiste, Roux, Simon, Salvagio Manta, Daniela, Sanges, R., Speich, Sabrina, Sprovieri, M., Sunagawa, Shinichi, Taillandier, Vincent, Tanaka, Atsuko, Tirichine, Leila, Trottier, Camille, Uitz, Julia, Veluchamy, Alaguraj, Veselá, Jana, Vincent, Flora, Yau, Sheree, Kandels‐Lewis, Stefanie, Searson, Sarah, Dimier, Céline, Picheral, Marc, Bork, Peer, Boss, Emmanuel, Vargas, Colomban de, Follows, M.J., Grimsley, Nigel, Hingamp, Pascal, Karsenti, Eric, Sordino, Paolo, Stemmann, Lars, Sullivan, Matthew B., Tagliabue, Alessandro, Zingone, Adriana, Garczarek, Laurence, D'Ortenzio, Fabrizio, Testor, Pierre, Not, Fabrice, Ribera d’Alcalà, Maurizio, Wincker, Patrick, Bowler, Chris, Guidi, Lionel, Iudicone, Daniele
Published 2019-01