Draft genome sequence of Bradyrhizobium manausense strain BR 3351T, an effective symbiont isolated from Amazon rainforest

Draft genome sequence of Bradyrhizobium manausense strain BR 3351T, an effective symbiont isolated from Amazon rainforest

ABSTRACT The strain BR 3351T (Bradyrhizobium manausense) was obtained from nodules of cowpea (Vigna unguiculata L. Walp) growing in soil collected from Amazon rainforest. Furthermore, it was observed that the strain has high capacity to fix nitrogen symbiotically in symbioses with cowpea. We report here the draft genome sequence of strain BR 3351T. The information presented will be important for comparative analysis of nodulation and nitrogen fixation for diazotrophic bacteria. A draft genome with 9,145,311 bp and 62.9% of GC content was assembled in 127 scaffolds using 100 bp pair-end Illumina MiSeq system. The RAST annotation identified 8603 coding sequences, 51 RNAs genes, classified in 504 subsystems.

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Main Authors: Simões-Araújo,Jean Luiz, Rumjanek,Norma Gouvêa, Xavier,Gustavo Ribeiro, Zilli,Jerri Édson
Format: Digital revista
Language:English
Published: Sociedade Brasileira de Microbiologia 2017
Online Access:http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822017000400610
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spelling oai:scielo:S1517-838220170004006102017-10-31Draft genome sequence of Bradyrhizobium manausense strain BR 3351T, an effective symbiont isolated from Amazon rainforestSimões-Araújo,Jean LuizRumjanek,Norma GouvêaXavier,Gustavo RibeiroZilli,Jerri Édson Amazon forest Biological nitrogen fixation Next generation sequencing Nodulation Cowpea ABSTRACT The strain BR 3351T (Bradyrhizobium manausense) was obtained from nodules of cowpea (Vigna unguiculata L. Walp) growing in soil collected from Amazon rainforest. Furthermore, it was observed that the strain has high capacity to fix nitrogen symbiotically in symbioses with cowpea. We report here the draft genome sequence of strain BR 3351T. The information presented will be important for comparative analysis of nodulation and nitrogen fixation for diazotrophic bacteria. A draft genome with 9,145,311 bp and 62.9% of GC content was assembled in 127 scaffolds using 100 bp pair-end Illumina MiSeq system. The RAST annotation identified 8603 coding sequences, 51 RNAs genes, classified in 504 subsystems.info:eu-repo/semantics/openAccessSociedade Brasileira de MicrobiologiaBrazilian Journal of Microbiology v.48 n.4 20172017-12-01info:eu-repo/semantics/articletext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822017000400610en10.1016/j.bjm.2016.10.025
institution SCIELO
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country Brasil
countrycode BR
component Revista
access En linea
databasecode rev-scielo-br
tag revista
region America del Sur
libraryname SciELO
language English
format Digital
author Simões-Araújo,Jean Luiz
Rumjanek,Norma Gouvêa
Xavier,Gustavo Ribeiro
Zilli,Jerri Édson
spellingShingle Simões-Araújo,Jean Luiz
Rumjanek,Norma Gouvêa
Xavier,Gustavo Ribeiro
Zilli,Jerri Édson
Draft genome sequence of Bradyrhizobium manausense strain BR 3351T, an effective symbiont isolated from Amazon rainforest
author_facet Simões-Araújo,Jean Luiz
Rumjanek,Norma Gouvêa
Xavier,Gustavo Ribeiro
Zilli,Jerri Édson
author_sort Simões-Araújo,Jean Luiz
title Draft genome sequence of Bradyrhizobium manausense strain BR 3351T, an effective symbiont isolated from Amazon rainforest
title_short Draft genome sequence of Bradyrhizobium manausense strain BR 3351T, an effective symbiont isolated from Amazon rainforest
title_full Draft genome sequence of Bradyrhizobium manausense strain BR 3351T, an effective symbiont isolated from Amazon rainforest
title_fullStr Draft genome sequence of Bradyrhizobium manausense strain BR 3351T, an effective symbiont isolated from Amazon rainforest
title_full_unstemmed Draft genome sequence of Bradyrhizobium manausense strain BR 3351T, an effective symbiont isolated from Amazon rainforest
title_sort draft genome sequence of bradyrhizobium manausense strain br 3351t, an effective symbiont isolated from amazon rainforest
description ABSTRACT The strain BR 3351T (Bradyrhizobium manausense) was obtained from nodules of cowpea (Vigna unguiculata L. Walp) growing in soil collected from Amazon rainforest. Furthermore, it was observed that the strain has high capacity to fix nitrogen symbiotically in symbioses with cowpea. We report here the draft genome sequence of strain BR 3351T. The information presented will be important for comparative analysis of nodulation and nitrogen fixation for diazotrophic bacteria. A draft genome with 9,145,311 bp and 62.9% of GC content was assembled in 127 scaffolds using 100 bp pair-end Illumina MiSeq system. The RAST annotation identified 8603 coding sequences, 51 RNAs genes, classified in 504 subsystems.
publisher Sociedade Brasileira de Microbiologia
publishDate 2017
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822017000400610
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AT xaviergustavoribeiro draftgenomesequenceofbradyrhizobiummanausensestrainbr3351taneffectivesymbiontisolatedfromamazonrainforest
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