SARS-CoV-2 isolation from the first reported patients in Brazil and establishment of a coordinated task network

BACKGROUND Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was confirmed in Brazil in February 2020, the first cases were followed by an increase in the number of cases throughout the country, resulting in an important public health crisis that requires fast and coordinated responses. OBJECTIVES The objective of this work is to describe the isolation and propagation properties of SARS-CoV-2 isolates from the first confirmed cases of coronavirus disease 2019 (COVID-19) in Brazil. METHODS After diagnosis in patients that returned from Italy to the São Paulo city in late February by RT-PCR, SARS-CoV-2 isolates were obtained in cell cultures and characterised by full genome sequencing, electron microscopy and in vitro replication properties. FINDINGS The virus isolate was recovered from nasopharyngeal specimen, propagated in Vero cells (E6, CCL-81 and hSLAM), with clear cytopathic effects, and characterised by full genome sequencing, electron microscopy and in vitro replication properties. Virus stocks - viable (titre 2.11 × 106 TCID50/mL, titre 1.5 × 106 PFUs/mL) and inactivated from isolate SARS.CoV2/SP02.2020.HIAE.Br were prepared and set available to the public health authorities and the scientific community in Brazil and abroad. MAIN CONCLUSION We believe that the protocols for virus growth and studies here described and the distribution initiative may constitute a viable model for other developing countries, not only to help a rapid effective pandemic response, but also to facilitate and support basic scientific research.

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Main Authors: Araujo,Danielle Bastos, Machado,Rafael Rahal Guaragna, Amgarten,Deyvid Emanuel, Malta,Fernanda de Mello, de Araujo,Gabriel Guarany, Monteiro,Cairo Oliveira, Candido,Erika Donizetti, Soares,Camila Pereira, de Menezes,Fernando Gatti, Pires,Ana Carolina Cornachioni, Santana,Rúbia Anita Ferraz, Viana,Amanda de Oliveira, Dorlass,Erick, Thomazelli,Luciano, Ferreira,Luis Carlos de Sousa, Botosso,Viviane Fongaro, Carvalho,Cristiane Rodrigues Guzzo, Oliveira,Danielle Bruna Leal, Pinho,João Renato Rebello, Durigon,Edison Luiz
Format: Digital revista
Language:English
Published: Instituto Oswaldo Cruz, Ministério da Saúde 2020
Online Access:http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762020000100344
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spelling oai:scielo:S0074-027620200001003442020-10-20SARS-CoV-2 isolation from the first reported patients in Brazil and establishment of a coordinated task networkAraujo,Danielle BastosMachado,Rafael Rahal GuaragnaAmgarten,Deyvid EmanuelMalta,Fernanda de Mellode Araujo,Gabriel GuaranyMonteiro,Cairo OliveiraCandido,Erika DonizettiSoares,Camila Pereirade Menezes,Fernando GattiPires,Ana Carolina CornachioniSantana,Rúbia Anita FerrazViana,Amanda de OliveiraDorlass,ErickThomazelli,LucianoFerreira,Luis Carlos de SousaBotosso,Viviane FongaroCarvalho,Cristiane Rodrigues GuzzoOliveira,Danielle Bruna LealPinho,João Renato RebelloDurigon,Edison Luiz SARS-CoV-2 COVID-19 virus isolation cell culture virus network BACKGROUND Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was confirmed in Brazil in February 2020, the first cases were followed by an increase in the number of cases throughout the country, resulting in an important public health crisis that requires fast and coordinated responses. OBJECTIVES The objective of this work is to describe the isolation and propagation properties of SARS-CoV-2 isolates from the first confirmed cases of coronavirus disease 2019 (COVID-19) in Brazil. METHODS After diagnosis in patients that returned from Italy to the São Paulo city in late February by RT-PCR, SARS-CoV-2 isolates were obtained in cell cultures and characterised by full genome sequencing, electron microscopy and in vitro replication properties. FINDINGS The virus isolate was recovered from nasopharyngeal specimen, propagated in Vero cells (E6, CCL-81 and hSLAM), with clear cytopathic effects, and characterised by full genome sequencing, electron microscopy and in vitro replication properties. Virus stocks - viable (titre 2.11 × 106 TCID50/mL, titre 1.5 × 106 PFUs/mL) and inactivated from isolate SARS.CoV2/SP02.2020.HIAE.Br were prepared and set available to the public health authorities and the scientific community in Brazil and abroad. MAIN CONCLUSION We believe that the protocols for virus growth and studies here described and the distribution initiative may constitute a viable model for other developing countries, not only to help a rapid effective pandemic response, but also to facilitate and support basic scientific research.info:eu-repo/semantics/openAccessInstituto Oswaldo Cruz, Ministério da SaúdeMemórias do Instituto Oswaldo Cruz v.115 20202020-01-01info:eu-repo/semantics/articletext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762020000100344en10.1590/0074-02760200342
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language English
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author Araujo,Danielle Bastos
Machado,Rafael Rahal Guaragna
Amgarten,Deyvid Emanuel
Malta,Fernanda de Mello
de Araujo,Gabriel Guarany
Monteiro,Cairo Oliveira
Candido,Erika Donizetti
Soares,Camila Pereira
de Menezes,Fernando Gatti
Pires,Ana Carolina Cornachioni
Santana,Rúbia Anita Ferraz
Viana,Amanda de Oliveira
Dorlass,Erick
Thomazelli,Luciano
Ferreira,Luis Carlos de Sousa
Botosso,Viviane Fongaro
Carvalho,Cristiane Rodrigues Guzzo
Oliveira,Danielle Bruna Leal
Pinho,João Renato Rebello
Durigon,Edison Luiz
spellingShingle Araujo,Danielle Bastos
Machado,Rafael Rahal Guaragna
Amgarten,Deyvid Emanuel
Malta,Fernanda de Mello
de Araujo,Gabriel Guarany
Monteiro,Cairo Oliveira
Candido,Erika Donizetti
Soares,Camila Pereira
de Menezes,Fernando Gatti
Pires,Ana Carolina Cornachioni
Santana,Rúbia Anita Ferraz
Viana,Amanda de Oliveira
Dorlass,Erick
Thomazelli,Luciano
Ferreira,Luis Carlos de Sousa
Botosso,Viviane Fongaro
Carvalho,Cristiane Rodrigues Guzzo
Oliveira,Danielle Bruna Leal
Pinho,João Renato Rebello
Durigon,Edison Luiz
SARS-CoV-2 isolation from the first reported patients in Brazil and establishment of a coordinated task network
author_facet Araujo,Danielle Bastos
Machado,Rafael Rahal Guaragna
Amgarten,Deyvid Emanuel
Malta,Fernanda de Mello
de Araujo,Gabriel Guarany
Monteiro,Cairo Oliveira
Candido,Erika Donizetti
Soares,Camila Pereira
de Menezes,Fernando Gatti
Pires,Ana Carolina Cornachioni
Santana,Rúbia Anita Ferraz
Viana,Amanda de Oliveira
Dorlass,Erick
Thomazelli,Luciano
Ferreira,Luis Carlos de Sousa
Botosso,Viviane Fongaro
Carvalho,Cristiane Rodrigues Guzzo
Oliveira,Danielle Bruna Leal
Pinho,João Renato Rebello
Durigon,Edison Luiz
author_sort Araujo,Danielle Bastos
title SARS-CoV-2 isolation from the first reported patients in Brazil and establishment of a coordinated task network
title_short SARS-CoV-2 isolation from the first reported patients in Brazil and establishment of a coordinated task network
title_full SARS-CoV-2 isolation from the first reported patients in Brazil and establishment of a coordinated task network
title_fullStr SARS-CoV-2 isolation from the first reported patients in Brazil and establishment of a coordinated task network
title_full_unstemmed SARS-CoV-2 isolation from the first reported patients in Brazil and establishment of a coordinated task network
title_sort sars-cov-2 isolation from the first reported patients in brazil and establishment of a coordinated task network
description BACKGROUND Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was confirmed in Brazil in February 2020, the first cases were followed by an increase in the number of cases throughout the country, resulting in an important public health crisis that requires fast and coordinated responses. OBJECTIVES The objective of this work is to describe the isolation and propagation properties of SARS-CoV-2 isolates from the first confirmed cases of coronavirus disease 2019 (COVID-19) in Brazil. METHODS After diagnosis in patients that returned from Italy to the São Paulo city in late February by RT-PCR, SARS-CoV-2 isolates were obtained in cell cultures and characterised by full genome sequencing, electron microscopy and in vitro replication properties. FINDINGS The virus isolate was recovered from nasopharyngeal specimen, propagated in Vero cells (E6, CCL-81 and hSLAM), with clear cytopathic effects, and characterised by full genome sequencing, electron microscopy and in vitro replication properties. Virus stocks - viable (titre 2.11 × 106 TCID50/mL, titre 1.5 × 106 PFUs/mL) and inactivated from isolate SARS.CoV2/SP02.2020.HIAE.Br were prepared and set available to the public health authorities and the scientific community in Brazil and abroad. MAIN CONCLUSION We believe that the protocols for virus growth and studies here described and the distribution initiative may constitute a viable model for other developing countries, not only to help a rapid effective pandemic response, but also to facilitate and support basic scientific research.
publisher Instituto Oswaldo Cruz, Ministério da Saúde
publishDate 2020
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762020000100344
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