Diagnosis of Brazilian vesiculoviruses by reverse transcription-polymerase chain reaction

We describe a reverse transcription-polymerase chain reaction (RT-PCR) and a nested-PCR for diagnosis of Piry, Carajás, Cocal, and Alagoas vesiculoviruses from Brazil. The RNA extracts of viral and clinical samples were submitted to a RT-PCR using Vesiculovirus G primers that amplify part of the glycoprotein gene. The RT-PCR produced amplicons of expected size, 290 base pair, for the four studied viruses. The RT-PCR showed a high sensitivity being 151.3 times (2.18 log) more sensitive for the detection of Piry virus than the classical procedure for virus detection in tissue culture based on the viral cytophatic effect. Amplicons had nucleotides sequenced and were aligned in order to select internal primers for a nested-PCR to confirm the origin of Piry, Carajás, Cocal, and Alagoas Vesiculovirus. Ten blood and tarsal pad epithelial samples of infected Guinea-pigs had Vesiculovirus genome amplified by RT-nested-PCR.

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Main Authors: Bonutti,Daniela Wey, Figueiredo,Luiz Tadeu Moraes
Format: Digital revista
Language:English
Published: Instituto Oswaldo Cruz, Ministério da Saúde 2005
Online Access:http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762005000200014
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spelling oai:scielo:S0074-027620050002000142005-07-22Diagnosis of Brazilian vesiculoviruses by reverse transcription-polymerase chain reactionBonutti,Daniela WeyFigueiredo,Luiz Tadeu Moraes Vesiculovirus vesicular stomatitis virus reverse transcription-polymerase chain reaction diagnosis nested-PCR Brazil We describe a reverse transcription-polymerase chain reaction (RT-PCR) and a nested-PCR for diagnosis of Piry, Carajás, Cocal, and Alagoas vesiculoviruses from Brazil. The RNA extracts of viral and clinical samples were submitted to a RT-PCR using Vesiculovirus G primers that amplify part of the glycoprotein gene. The RT-PCR produced amplicons of expected size, 290 base pair, for the four studied viruses. The RT-PCR showed a high sensitivity being 151.3 times (2.18 log) more sensitive for the detection of Piry virus than the classical procedure for virus detection in tissue culture based on the viral cytophatic effect. Amplicons had nucleotides sequenced and were aligned in order to select internal primers for a nested-PCR to confirm the origin of Piry, Carajás, Cocal, and Alagoas Vesiculovirus. Ten blood and tarsal pad epithelial samples of infected Guinea-pigs had Vesiculovirus genome amplified by RT-nested-PCR.info:eu-repo/semantics/openAccessInstituto Oswaldo Cruz, Ministério da SaúdeMemórias do Instituto Oswaldo Cruz v.100 n.2 20052005-04-01info:eu-repo/semantics/articletext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762005000200014en10.1590/S0074-02762005000200014
institution SCIELO
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country Brasil
countrycode BR
component Revista
access En linea
databasecode rev-scielo-br
tag revista
region America del Sur
libraryname SciELO
language English
format Digital
author Bonutti,Daniela Wey
Figueiredo,Luiz Tadeu Moraes
spellingShingle Bonutti,Daniela Wey
Figueiredo,Luiz Tadeu Moraes
Diagnosis of Brazilian vesiculoviruses by reverse transcription-polymerase chain reaction
author_facet Bonutti,Daniela Wey
Figueiredo,Luiz Tadeu Moraes
author_sort Bonutti,Daniela Wey
title Diagnosis of Brazilian vesiculoviruses by reverse transcription-polymerase chain reaction
title_short Diagnosis of Brazilian vesiculoviruses by reverse transcription-polymerase chain reaction
title_full Diagnosis of Brazilian vesiculoviruses by reverse transcription-polymerase chain reaction
title_fullStr Diagnosis of Brazilian vesiculoviruses by reverse transcription-polymerase chain reaction
title_full_unstemmed Diagnosis of Brazilian vesiculoviruses by reverse transcription-polymerase chain reaction
title_sort diagnosis of brazilian vesiculoviruses by reverse transcription-polymerase chain reaction
description We describe a reverse transcription-polymerase chain reaction (RT-PCR) and a nested-PCR for diagnosis of Piry, Carajás, Cocal, and Alagoas vesiculoviruses from Brazil. The RNA extracts of viral and clinical samples were submitted to a RT-PCR using Vesiculovirus G primers that amplify part of the glycoprotein gene. The RT-PCR produced amplicons of expected size, 290 base pair, for the four studied viruses. The RT-PCR showed a high sensitivity being 151.3 times (2.18 log) more sensitive for the detection of Piry virus than the classical procedure for virus detection in tissue culture based on the viral cytophatic effect. Amplicons had nucleotides sequenced and were aligned in order to select internal primers for a nested-PCR to confirm the origin of Piry, Carajás, Cocal, and Alagoas Vesiculovirus. Ten blood and tarsal pad epithelial samples of infected Guinea-pigs had Vesiculovirus genome amplified by RT-nested-PCR.
publisher Instituto Oswaldo Cruz, Ministério da Saúde
publishDate 2005
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762005000200014
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