Genetic and physical mapping of the earliness perse locus Eps - Am1 in Triticum monococcum identifies early flowering 3 (ELF3) as a candidate gene

Wheat cultivars exposed to optimal photoperiod and vernalization treatments still exhibit differences in heading time. This variation, known as earliness per se (Eps), is important for the fine-tuning of flowering and the adaptation to different environments. We previously identified the Eps-Am1 locus from Triticum monococcum and showed that the allele from cultivated accession DV92 significantly delays flowering and increases the number of spikelets per spike relative to the allele from wild accession G3116. We expanded a high-density genetic map and physical map of the Eps-Am1 region and identified the wheat ortholog of circadian clock regulator EARLY FLOWERING 3 (ELF3) as one of the candidate genes. No differences were found in ELF3 transcript levels between NILs carrying the DV92 and G3116 Eps-Am1 alleles, but the encoded ELF3 proteins differed in four amino acids. These differences were associated with altered transcription profiles of PIF-like, PPD1 and FT1, which are known downstream targets of ELF3. Tetraploid wheat lines with combined truncation mutations in the A- and B-genome copies of ELF3 flowered earlier and had less spikelets per spike than the wild type control under SD and LD conditions. Both effects were stronger in the photoperiod sensitive than the photoperiod insensitive background, indicating an epistatic interaction between PPD1 and ELF3. By contrast, the introgression of the T. monococcum chromosome segment carrying Eps-Am1-l allele from DV92 into durum wheat delayed flowering and increased the number of spikelets per spike in the field, providing a novel allele to modulate flowering time and spike development in wheat.

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Main Authors: Tranquilli, Gabriela, Lewis, Silvina, Kippes, Nestor, Dubcovsky, Jorge, Alvarez, María Alejandra
Format: info:eu-repo/semantics/article biblioteca
Language:eng
Published: 2016-07
Subjects:Triticum Monococcum, Trigo, Floración, Genes, Wheat, Flowering,
Online Access:http://hdl.handle.net/20.500.12123/1703
https://link.springer.com/article/10.1007%2Fs10142-016-0490-3
https://doi.org/10.1007/s10142-016-0490-3
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spelling oai:localhost:20.500.12123-17032019-01-04T16:58:16Z Genetic and physical mapping of the earliness perse locus Eps - Am1 in Triticum monococcum identifies early flowering 3 (ELF3) as a candidate gene Tranquilli, Gabriela Lewis, Silvina Kippes, Nestor Dubcovsky, Jorge Alvarez, María Alejandra Triticum Monococcum Trigo Floración Genes Wheat Flowering Wheat cultivars exposed to optimal photoperiod and vernalization treatments still exhibit differences in heading time. This variation, known as earliness per se (Eps), is important for the fine-tuning of flowering and the adaptation to different environments. We previously identified the Eps-Am1 locus from Triticum monococcum and showed that the allele from cultivated accession DV92 significantly delays flowering and increases the number of spikelets per spike relative to the allele from wild accession G3116. We expanded a high-density genetic map and physical map of the Eps-Am1 region and identified the wheat ortholog of circadian clock regulator EARLY FLOWERING 3 (ELF3) as one of the candidate genes. No differences were found in ELF3 transcript levels between NILs carrying the DV92 and G3116 Eps-Am1 alleles, but the encoded ELF3 proteins differed in four amino acids. These differences were associated with altered transcription profiles of PIF-like, PPD1 and FT1, which are known downstream targets of ELF3. Tetraploid wheat lines with combined truncation mutations in the A- and B-genome copies of ELF3 flowered earlier and had less spikelets per spike than the wild type control under SD and LD conditions. Both effects were stronger in the photoperiod sensitive than the photoperiod insensitive background, indicating an epistatic interaction between PPD1 and ELF3. By contrast, the introgression of the T. monococcum chromosome segment carrying Eps-Am1-l allele from DV92 into durum wheat delayed flowering and increased the number of spikelets per spike in the field, providing a novel allele to modulate flowering time and spike development in wheat. Inst. de Recursos Biológicos Fil: Alvarez, María Alejandra. University of California. Department of Plant Sciences; Estados Unidos Fil: Tranquilli, Gabriela. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Recursos Biológicos; Argentina Fil: Lewis, Silvina. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Recursos Biológicos; Argentina Fil: Kippes, Nestor. University of California. Department of Plant Sciences; Estados Unidos Fil: Dubcovsky, Jorge. University of California. Department of Plant Sciences; Estados Unidos. Howard Hughes Medical Institute; Estados Unidos 2017-11-08T11:41:21Z 2017-11-08T11:41:21Z 2016-07 info:eu-repo/semantics/article info:ar-repo/semantics/artículo info:eu-repo/semantics/publishedVersion http://hdl.handle.net/20.500.12123/1703 https://link.springer.com/article/10.1007%2Fs10142-016-0490-3 1438-793X (Print) 1438-7948 (Online) https://doi.org/10.1007/s10142-016-0490-3 eng info:eu-repo/semantics/openAccess application/pdf Functional & Integrative Genomics 16 (4) : 365–382 (July 2016)
institution INTA AR
collection DSpace
country Argentina
countrycode AR
component Bibliográfico
access En linea
databasecode dig-inta-ar
tag biblioteca
region America del Sur
libraryname Biblioteca Central del INTA Argentina
language eng
topic Triticum Monococcum
Trigo
Floración
Genes
Wheat
Flowering
Triticum Monococcum
Trigo
Floración
Genes
Wheat
Flowering
spellingShingle Triticum Monococcum
Trigo
Floración
Genes
Wheat
Flowering
Triticum Monococcum
Trigo
Floración
Genes
Wheat
Flowering
Tranquilli, Gabriela
Lewis, Silvina
Kippes, Nestor
Dubcovsky, Jorge
Alvarez, María Alejandra
Genetic and physical mapping of the earliness perse locus Eps - Am1 in Triticum monococcum identifies early flowering 3 (ELF3) as a candidate gene
description Wheat cultivars exposed to optimal photoperiod and vernalization treatments still exhibit differences in heading time. This variation, known as earliness per se (Eps), is important for the fine-tuning of flowering and the adaptation to different environments. We previously identified the Eps-Am1 locus from Triticum monococcum and showed that the allele from cultivated accession DV92 significantly delays flowering and increases the number of spikelets per spike relative to the allele from wild accession G3116. We expanded a high-density genetic map and physical map of the Eps-Am1 region and identified the wheat ortholog of circadian clock regulator EARLY FLOWERING 3 (ELF3) as one of the candidate genes. No differences were found in ELF3 transcript levels between NILs carrying the DV92 and G3116 Eps-Am1 alleles, but the encoded ELF3 proteins differed in four amino acids. These differences were associated with altered transcription profiles of PIF-like, PPD1 and FT1, which are known downstream targets of ELF3. Tetraploid wheat lines with combined truncation mutations in the A- and B-genome copies of ELF3 flowered earlier and had less spikelets per spike than the wild type control under SD and LD conditions. Both effects were stronger in the photoperiod sensitive than the photoperiod insensitive background, indicating an epistatic interaction between PPD1 and ELF3. By contrast, the introgression of the T. monococcum chromosome segment carrying Eps-Am1-l allele from DV92 into durum wheat delayed flowering and increased the number of spikelets per spike in the field, providing a novel allele to modulate flowering time and spike development in wheat.
format info:eu-repo/semantics/article
topic_facet Triticum Monococcum
Trigo
Floración
Genes
Wheat
Flowering
author Tranquilli, Gabriela
Lewis, Silvina
Kippes, Nestor
Dubcovsky, Jorge
Alvarez, María Alejandra
author_facet Tranquilli, Gabriela
Lewis, Silvina
Kippes, Nestor
Dubcovsky, Jorge
Alvarez, María Alejandra
author_sort Tranquilli, Gabriela
title Genetic and physical mapping of the earliness perse locus Eps - Am1 in Triticum monococcum identifies early flowering 3 (ELF3) as a candidate gene
title_short Genetic and physical mapping of the earliness perse locus Eps - Am1 in Triticum monococcum identifies early flowering 3 (ELF3) as a candidate gene
title_full Genetic and physical mapping of the earliness perse locus Eps - Am1 in Triticum monococcum identifies early flowering 3 (ELF3) as a candidate gene
title_fullStr Genetic and physical mapping of the earliness perse locus Eps - Am1 in Triticum monococcum identifies early flowering 3 (ELF3) as a candidate gene
title_full_unstemmed Genetic and physical mapping of the earliness perse locus Eps - Am1 in Triticum monococcum identifies early flowering 3 (ELF3) as a candidate gene
title_sort genetic and physical mapping of the earliness perse locus eps - am1 in triticum monococcum identifies early flowering 3 (elf3) as a candidate gene
publishDate 2016-07
url http://hdl.handle.net/20.500.12123/1703
https://link.springer.com/article/10.1007%2Fs10142-016-0490-3
https://doi.org/10.1007/s10142-016-0490-3
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