On the haplotype diversity along the genome in Spanish beef cattle populations
This study analyzed the haplotype diversity along the genome of seven Spanish Beef Cattle populations within regions of 500 kb using the information provided by the BovineHD Beadchip. The results of the analysis pointed out a strong variability of the haplotype diversity across the genome, which is greatly conserved across populations. This strong concordance between populations suggests that the reasons behind it are intrinsic to the structure of the bovine genome and caused probably by the mutation or recombination rate. Nevertheless, some of the genomic regions with very large haplotype diversity are also due of genome assembly errors. © 2017 Elsevier B.V.
Saved in:
| Main Authors: | , , , , , , , , , |
|---|---|
| Format: | artículo biblioteca |
| Language: | English |
| Published: |
Elsevier
2017
|
| Subjects: | Haplotype diversity, Beef cattle, Recombination, Mutation, Genome assembly errors, |
| Online Access: | http://hdl.handle.net/20.500.12792/3033 http://hdl.handle.net/10261/292123 |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
| id |
dig-inia-es-10261-292123 |
|---|---|
| record_format |
koha |
| spelling |
dig-inia-es-10261-2921232023-02-20T07:25:45Z On the haplotype diversity along the genome in Spanish beef cattle populations Mouresan, E. F. González-Rodríguez, A. Cañas-Álvarez, J. J. Díaz, C. Altarriba, J. Baró, J. A. Piedrafita, J. Molina, A. Toro, M. A. Varona, L. Haplotype diversity Beef cattle Recombination Mutation Genome assembly errors This study analyzed the haplotype diversity along the genome of seven Spanish Beef Cattle populations within regions of 500 kb using the information provided by the BovineHD Beadchip. The results of the analysis pointed out a strong variability of the haplotype diversity across the genome, which is greatly conserved across populations. This strong concordance between populations suggests that the reasons behind it are intrinsic to the structure of the bovine genome and caused probably by the mutation or recombination rate. Nevertheless, some of the genomic regions with very large haplotype diversity are also due of genome assembly errors. © 2017 Elsevier B.V. 2023-02-20T07:25:45Z 2023-02-20T07:25:45Z 2017 artículo Livestock Science 201: 30-33 (2017) 1871-1413 http://hdl.handle.net/20.500.12792/3033 http://hdl.handle.net/10261/292123 10.1016/j.livsci.2017.04.015 en none Elsevier |
| institution |
INIA ES |
| collection |
DSpace |
| country |
España |
| countrycode |
ES |
| component |
Bibliográfico |
| access |
En linea |
| databasecode |
dig-inia-es |
| tag |
biblioteca |
| region |
Europa del Sur |
| libraryname |
Biblioteca del INIA España |
| language |
English |
| topic |
Haplotype diversity Beef cattle Recombination Mutation Genome assembly errors Haplotype diversity Beef cattle Recombination Mutation Genome assembly errors |
| spellingShingle |
Haplotype diversity Beef cattle Recombination Mutation Genome assembly errors Haplotype diversity Beef cattle Recombination Mutation Genome assembly errors Mouresan, E. F. González-Rodríguez, A. Cañas-Álvarez, J. J. Díaz, C. Altarriba, J. Baró, J. A. Piedrafita, J. Molina, A. Toro, M. A. Varona, L. On the haplotype diversity along the genome in Spanish beef cattle populations |
| description |
This study analyzed the haplotype diversity along the genome of seven Spanish Beef Cattle populations within regions of 500 kb using the information provided by the BovineHD Beadchip. The results of the analysis pointed out a strong variability of the haplotype diversity across the genome, which is greatly conserved across populations. This strong concordance between populations suggests that the reasons behind it are intrinsic to the structure of the bovine genome and caused probably by the mutation or recombination rate. Nevertheless, some of the genomic regions with very large haplotype diversity are also due of genome assembly errors. © 2017 Elsevier B.V. |
| format |
artículo |
| topic_facet |
Haplotype diversity Beef cattle Recombination Mutation Genome assembly errors |
| author |
Mouresan, E. F. González-Rodríguez, A. Cañas-Álvarez, J. J. Díaz, C. Altarriba, J. Baró, J. A. Piedrafita, J. Molina, A. Toro, M. A. Varona, L. |
| author_facet |
Mouresan, E. F. González-Rodríguez, A. Cañas-Álvarez, J. J. Díaz, C. Altarriba, J. Baró, J. A. Piedrafita, J. Molina, A. Toro, M. A. Varona, L. |
| author_sort |
Mouresan, E. F. |
| title |
On the haplotype diversity along the genome in Spanish beef cattle populations |
| title_short |
On the haplotype diversity along the genome in Spanish beef cattle populations |
| title_full |
On the haplotype diversity along the genome in Spanish beef cattle populations |
| title_fullStr |
On the haplotype diversity along the genome in Spanish beef cattle populations |
| title_full_unstemmed |
On the haplotype diversity along the genome in Spanish beef cattle populations |
| title_sort |
on the haplotype diversity along the genome in spanish beef cattle populations |
| publisher |
Elsevier |
| publishDate |
2017 |
| url |
http://hdl.handle.net/20.500.12792/3033 http://hdl.handle.net/10261/292123 |
| work_keys_str_mv |
AT mouresanef onthehaplotypediversityalongthegenomeinspanishbeefcattlepopulations AT gonzalezrodrigueza onthehaplotypediversityalongthegenomeinspanishbeefcattlepopulations AT canasalvarezjj onthehaplotypediversityalongthegenomeinspanishbeefcattlepopulations AT diazc onthehaplotypediversityalongthegenomeinspanishbeefcattlepopulations AT altarribaj onthehaplotypediversityalongthegenomeinspanishbeefcattlepopulations AT baroja onthehaplotypediversityalongthegenomeinspanishbeefcattlepopulations AT piedrafitaj onthehaplotypediversityalongthegenomeinspanishbeefcattlepopulations AT molinaa onthehaplotypediversityalongthegenomeinspanishbeefcattlepopulations AT toroma onthehaplotypediversityalongthegenomeinspanishbeefcattlepopulations AT varonal onthehaplotypediversityalongthegenomeinspanishbeefcattlepopulations |
| _version_ |
1767603301735464960 |