Eighty million years of rapid evolution of the primate Y chromosome
The Y chromosome usually plays a critical role in determining male sex and comprises sequence classes that have experienced unique evolutionary trajectories. Here we generated 19 new primate sex chromosome assemblies, analysed them with 10 existing assemblies and report rapid evolution of the Y chromosome across primates. The pseudoautosomal boundary has shifted at least six times during primate evolution, leading to the formation of a Simiiformes-specific evolutionary stratum and to the independent start of young strata in Catarrhini and Platyrrhini. Different primate lineages experienced different rates of gene loss and structural and chromatin change on their Y chromosomes. Selection on several Y-linked genes has contributed to the evolution of male developmental traits across the primates. Additionally, lineage-specific expansions of ampliconic regions have further increased the diversification of the structure and gene composition of the Y chromosome. Overall, our comprehensive analysis has broadened our knowledge of the evolution of the primate Y chromosome.
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Springer Nature
2023-07
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Online Access: | http://hdl.handle.net/10261/347891 http://dx.doi.org/10.13039/100008398 http://dx.doi.org/10.13039/501100002367 http://dx.doi.org/10.13039/501100001809 |
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dig-ibe-es-10261-3478912024-02-22T02:51:02Z Eighty million years of rapid evolution of the primate Y chromosome Zhou, Yang Zhan, Xiaoyu Jin, Jiazheng Zhou, Long Bergman, Juraj Li, Xuemei Rousselle, Marjolaine Riera, Meritxell Zhao, Lan Fang, Miaoquan Chen, Jiawei Fang, Qi Kuderna, Lukas F. K. Marqués-Bonet, Tomàs Kitayama, Haruka Hayakawa, Takashi Yao, Yong-Gang Yang, Huanming Cooper, David N. Qi, Xiaoguang Wu, Dong-Dong Schierup, Mikkel Heide Zhang, Guojie Chinese Academy of Sciences Villum Fonden National Natural Science Foundation of China Yunnan Province Kuderna, Lukas F. K. [0000-0002-9992-9295] Marqués-Bonet, Tomàs [0000-0002-5597-3075] The Y chromosome usually plays a critical role in determining male sex and comprises sequence classes that have experienced unique evolutionary trajectories. Here we generated 19 new primate sex chromosome assemblies, analysed them with 10 existing assemblies and report rapid evolution of the Y chromosome across primates. The pseudoautosomal boundary has shifted at least six times during primate evolution, leading to the formation of a Simiiformes-specific evolutionary stratum and to the independent start of young strata in Catarrhini and Platyrrhini. Different primate lineages experienced different rates of gene loss and structural and chromatin change on their Y chromosomes. Selection on several Y-linked genes has contributed to the evolution of male developmental traits across the primates. Additionally, lineage-specific expansions of ampliconic regions have further increased the diversification of the structure and gene composition of the Y chromosome. Overall, our comprehensive analysis has broadened our knowledge of the evolution of the primate Y chromosome. This study was supported by grants from Strategic Priority Research Program of the Chinese Academy of Sciences (XDB31020000 to G.Z.), International Partnership Program of Chinese Academy of Sciences (no. 152453KYSB20170002 to G.Z.), Villum Investigator Grant (no. 25900 to G.Z.), National Natural Science Foundation of China (31822048 to D.-D.W.), Yunnan Fundamental Research Project (2019FI010 to D.-D.W.) and The Animal Branch of the Germplasm Bank of Wild Species of Chinese Academy of Science (the Large Research Infrastructure Funding to D.-D.W.). No 2024-02-21T13:20:09Z 2024-02-21T13:20:09Z 2023-07 artículo Nature Ecology & Evolution 7: 1114-1130 (2023) http://hdl.handle.net/10261/347891 10.1038/s41559-022-01974-x 2397-334X http://dx.doi.org/10.13039/100008398 http://dx.doi.org/10.13039/501100002367 http://dx.doi.org/10.13039/501100001809 en https://doi.org/10.1038/s41559-022-01974-x Sí none Springer Nature |
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The Y chromosome usually plays a critical role in determining male sex and comprises sequence classes that have experienced unique evolutionary trajectories. Here we generated 19 new primate sex chromosome assemblies, analysed them with 10 existing assemblies and report rapid evolution of the Y chromosome across primates. The pseudoautosomal boundary has shifted at least six times during primate evolution, leading to the formation of a Simiiformes-specific evolutionary stratum and to the independent start of young strata in Catarrhini and Platyrrhini. Different primate lineages experienced different rates of gene loss and structural and chromatin change on their Y chromosomes. Selection on several Y-linked genes has contributed to the evolution of male developmental traits across the primates. Additionally, lineage-specific expansions of ampliconic regions have further increased the diversification of the structure and gene composition of the Y chromosome. Overall, our comprehensive analysis has broadened our knowledge of the evolution of the primate Y chromosome. |
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Chinese Academy of Sciences |
author_facet |
Chinese Academy of Sciences Zhou, Yang Zhan, Xiaoyu Jin, Jiazheng Zhou, Long Bergman, Juraj Li, Xuemei Rousselle, Marjolaine Riera, Meritxell Zhao, Lan Fang, Miaoquan Chen, Jiawei Fang, Qi Kuderna, Lukas F. K. Marqués-Bonet, Tomàs Kitayama, Haruka Hayakawa, Takashi Yao, Yong-Gang Yang, Huanming Cooper, David N. Qi, Xiaoguang Wu, Dong-Dong Schierup, Mikkel Heide Zhang, Guojie |
format |
artículo |
author |
Zhou, Yang Zhan, Xiaoyu Jin, Jiazheng Zhou, Long Bergman, Juraj Li, Xuemei Rousselle, Marjolaine Riera, Meritxell Zhao, Lan Fang, Miaoquan Chen, Jiawei Fang, Qi Kuderna, Lukas F. K. Marqués-Bonet, Tomàs Kitayama, Haruka Hayakawa, Takashi Yao, Yong-Gang Yang, Huanming Cooper, David N. Qi, Xiaoguang Wu, Dong-Dong Schierup, Mikkel Heide Zhang, Guojie |
spellingShingle |
Zhou, Yang Zhan, Xiaoyu Jin, Jiazheng Zhou, Long Bergman, Juraj Li, Xuemei Rousselle, Marjolaine Riera, Meritxell Zhao, Lan Fang, Miaoquan Chen, Jiawei Fang, Qi Kuderna, Lukas F. K. Marqués-Bonet, Tomàs Kitayama, Haruka Hayakawa, Takashi Yao, Yong-Gang Yang, Huanming Cooper, David N. Qi, Xiaoguang Wu, Dong-Dong Schierup, Mikkel Heide Zhang, Guojie Eighty million years of rapid evolution of the primate Y chromosome |
author_sort |
Zhou, Yang |
title |
Eighty million years of rapid evolution of the primate Y chromosome |
title_short |
Eighty million years of rapid evolution of the primate Y chromosome |
title_full |
Eighty million years of rapid evolution of the primate Y chromosome |
title_fullStr |
Eighty million years of rapid evolution of the primate Y chromosome |
title_full_unstemmed |
Eighty million years of rapid evolution of the primate Y chromosome |
title_sort |
eighty million years of rapid evolution of the primate y chromosome |
publisher |
Springer Nature |
publishDate |
2023-07 |
url |
http://hdl.handle.net/10261/347891 http://dx.doi.org/10.13039/100008398 http://dx.doi.org/10.13039/501100002367 http://dx.doi.org/10.13039/501100001809 |
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