Phage-bacteria infection networks

Phage and their bacterial hosts are the most abundant and genetically diverse group of organisms on the planet. Given their dominance, it is no wonder that many recent studies have found that phage-bacteria interactions strongly influence global biogeochemical cycles, incidence of human diseases, productivity of industrial microbial commodities, and patterns of microbial genome diversity. Unfortunately, given the extreme diversity and complexity of microbial communities, traditional analyses fail to characterize interaction patterns and underlying processes. Here, we review emerging systems approaches that combine empirical data with rigorous theoretical analysis to study phage-bacterial interactions as networks rather than as coupled interactions in isolation. © 2012 Elsevier Ltd.

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Bibliographic Details
Main Authors: Weitz, Joshua S., Poisot, Timothée, Meyer, Justin R., Flores, Cesar O., Valverde, Sergi, Sullivan, Matthew B., Hochberg, Michael E.
Other Authors: James S. McDonnell Foundation
Format: artículo biblioteca
Published: Elsevier 2013-02
Subjects:Complex networks, Theory, Functional diversity, Biodiversity, Ecosystem, Microbial ecology,
Online Access:http://hdl.handle.net/10261/115423
http://dx.doi.org/10.13039/100000913
http://dx.doi.org/10.13039/100000861
http://dx.doi.org/10.13039/100000936
http://dx.doi.org/10.13039/501100001665
http://dx.doi.org/10.13039/501100003151
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spelling dig-ibe-es-10261-1154232018-10-03T10:17:11Z Phage-bacteria infection networks Weitz, Joshua S. Poisot, Timothée Meyer, Justin R. Flores, Cesar O. Valverde, Sergi Sullivan, Matthew B. Hochberg, Michael E. James S. McDonnell Foundation Burroughs Wellcome Fund Gordon and Betty Moore Foundation Agence Nationale de la Recherche (France) Fonds de Recherche Nature et Technologies (Canada) Complex networks Theory Functional diversity Biodiversity Ecosystem Microbial ecology Phage and their bacterial hosts are the most abundant and genetically diverse group of organisms on the planet. Given their dominance, it is no wonder that many recent studies have found that phage-bacteria interactions strongly influence global biogeochemical cycles, incidence of human diseases, productivity of industrial microbial commodities, and patterns of microbial genome diversity. Unfortunately, given the extreme diversity and complexity of microbial communities, traditional analyses fail to characterize interaction patterns and underlying processes. Here, we review emerging systems approaches that combine empirical data with rigorous theoretical analysis to study phage-bacterial interactions as networks rather than as coupled interactions in isolation. © 2012 Elsevier Ltd. This research was supported by grants from the James S. McDonnell Foundation and the Burroughs Wellcome Fund (to J.S.W.), the MELS and FQRNT (to T.P.), the Gordon and Betty Moore Foundation (to M.B.S.), and the Agence National de Recherche (‘EvolStress’) and the James S. McDonnell Foundation (to M.E.H.). Peer Reviewed 2015-05-19T12:26:01Z 2015-05-19T12:26:01Z 2013-02 2015-05-19T12:26:01Z artículo http://purl.org/coar/resource_type/c_6501 doi: 10.1016/j.tim.2012.11.003 issn: 0966-842X e-issn: 1878-4380 Trends in Microbiology 21(2): 82-91 (2013) http://hdl.handle.net/10261/115423 10.1016/j.tim.2012.11.003 http://dx.doi.org/10.13039/100000913 http://dx.doi.org/10.13039/100000861 http://dx.doi.org/10.13039/100000936 http://dx.doi.org/10.13039/501100001665 http://dx.doi.org/10.13039/501100003151 http://dx.doi.org/10.1016/j.tim.2012.11.003 Sí none Elsevier
institution IBE ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-ibe-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del IBE España
topic Complex networks
Theory
Functional diversity
Biodiversity
Ecosystem
Microbial ecology
Complex networks
Theory
Functional diversity
Biodiversity
Ecosystem
Microbial ecology
spellingShingle Complex networks
Theory
Functional diversity
Biodiversity
Ecosystem
Microbial ecology
Complex networks
Theory
Functional diversity
Biodiversity
Ecosystem
Microbial ecology
Weitz, Joshua S.
Poisot, Timothée
Meyer, Justin R.
Flores, Cesar O.
Valverde, Sergi
Sullivan, Matthew B.
Hochberg, Michael E.
Phage-bacteria infection networks
description Phage and their bacterial hosts are the most abundant and genetically diverse group of organisms on the planet. Given their dominance, it is no wonder that many recent studies have found that phage-bacteria interactions strongly influence global biogeochemical cycles, incidence of human diseases, productivity of industrial microbial commodities, and patterns of microbial genome diversity. Unfortunately, given the extreme diversity and complexity of microbial communities, traditional analyses fail to characterize interaction patterns and underlying processes. Here, we review emerging systems approaches that combine empirical data with rigorous theoretical analysis to study phage-bacterial interactions as networks rather than as coupled interactions in isolation. © 2012 Elsevier Ltd.
author2 James S. McDonnell Foundation
author_facet James S. McDonnell Foundation
Weitz, Joshua S.
Poisot, Timothée
Meyer, Justin R.
Flores, Cesar O.
Valverde, Sergi
Sullivan, Matthew B.
Hochberg, Michael E.
format artículo
topic_facet Complex networks
Theory
Functional diversity
Biodiversity
Ecosystem
Microbial ecology
author Weitz, Joshua S.
Poisot, Timothée
Meyer, Justin R.
Flores, Cesar O.
Valverde, Sergi
Sullivan, Matthew B.
Hochberg, Michael E.
author_sort Weitz, Joshua S.
title Phage-bacteria infection networks
title_short Phage-bacteria infection networks
title_full Phage-bacteria infection networks
title_fullStr Phage-bacteria infection networks
title_full_unstemmed Phage-bacteria infection networks
title_sort phage-bacteria infection networks
publisher Elsevier
publishDate 2013-02
url http://hdl.handle.net/10261/115423
http://dx.doi.org/10.13039/100000913
http://dx.doi.org/10.13039/100000861
http://dx.doi.org/10.13039/100000936
http://dx.doi.org/10.13039/501100001665
http://dx.doi.org/10.13039/501100003151
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AT poisottimothee phagebacteriainfectionnetworks
AT meyerjustinr phagebacteriainfectionnetworks
AT florescesaro phagebacteriainfectionnetworks
AT valverdesergi phagebacteriainfectionnetworks
AT sullivanmatthewb phagebacteriainfectionnetworks
AT hochbergmichaele phagebacteriainfectionnetworks
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