A new suite of twenty-two polymorphic microsatellite loci in the parasitic wasp, Habrobracon hebetor (Hymenoptera: Braconidae): Promising molecular tools for studying the population genetics of several beneficial braconid species

Combining a biotin-enrichment protocol and 454GS-FLX titanium pyrosequencing technology, we characterised 22 polymorphic microsatellite loci from the parasitic wasp, Habrobracon hebetor (Say) (Hymenoptera: Braconidae), a cosmopolitan species commonly used in biological control against a wide range of both major lepidopterous pests of stored products and field crops in different parts of the world. Three multiplex PCR sets were optimised and characterised across 46 H. hebetor specimens from two samples collected from millet fields in Niger. Two to 11 alleles were found per locus and observed heterozygosity ranged from 0.289 to 0.826. Polymorphism was detected in both samples with a similar level of observed heterozygosity (0.482 vs. 0.502) and number of alleles (4.1 vs. 3.6). Deviation from Hardy-Weinberg equilibrium was detected at the same five loci in both samples and five or seven more loci in each sample but was not associated with heterozygote deficiencies. Even though evidence for linkage disequilibrium was found between a few alleles, these new loci segregated independently. The variability of the 22 loci will enable estimates of genetic diversity and structure patterns, as well as gene flow between H. hebetor populations at different spatial scales. Cross-species amplifications were successful among the six Bracon spp. tested and nine loci will be particularly appropriate for population genetic studies in B. brevicornis.

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Main Authors: Garba, Madougou, Loiseau, Anne, Benoit, Laure, Gauthier, Nathalie
Format: article biblioteca
Language:eng
Subjects:H10 - Ravageurs des plantes, J11 - Manutention, transport, stockage et conservation des produits d'origine végétale, polymorphisme génétique, lutte antiparasite en entreposage, locus, microsatellite, variation génétique, http://aims.fao.org/aos/agrovoc/c_24031, http://aims.fao.org/aos/agrovoc/c_7432, http://aims.fao.org/aos/agrovoc/c_24869, http://aims.fao.org/aos/agrovoc/c_36574, http://aims.fao.org/aos/agrovoc/c_15975,
Online Access:http://agritrop.cirad.fr/582337/
http://agritrop.cirad.fr/582337/1/Benoit-European%20Journal%20of%20Entomology-2016-113%20pp265-269.pdf
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spelling dig-cirad-fr-5823372024-01-29T05:36:51Z http://agritrop.cirad.fr/582337/ http://agritrop.cirad.fr/582337/ A new suite of twenty-two polymorphic microsatellite loci in the parasitic wasp, Habrobracon hebetor (Hymenoptera: Braconidae): Promising molecular tools for studying the population genetics of several beneficial braconid species. Garba Madougou, Loiseau Anne, Benoit Laure, Gauthier Nathalie. 2016. European Journal of Entomology, 113 : 265-269.https://doi.org/10.14411/eje.2016.031 <https://doi.org/10.14411/eje.2016.031> A new suite of twenty-two polymorphic microsatellite loci in the parasitic wasp, Habrobracon hebetor (Hymenoptera: Braconidae): Promising molecular tools for studying the population genetics of several beneficial braconid species Garba, Madougou Loiseau, Anne Benoit, Laure Gauthier, Nathalie eng 2016 European Journal of Entomology H10 - Ravageurs des plantes J11 - Manutention, transport, stockage et conservation des produits d'origine végétale polymorphisme génétique lutte antiparasite en entreposage locus microsatellite variation génétique http://aims.fao.org/aos/agrovoc/c_24031 http://aims.fao.org/aos/agrovoc/c_7432 http://aims.fao.org/aos/agrovoc/c_24869 http://aims.fao.org/aos/agrovoc/c_36574 http://aims.fao.org/aos/agrovoc/c_15975 Combining a biotin-enrichment protocol and 454GS-FLX titanium pyrosequencing technology, we characterised 22 polymorphic microsatellite loci from the parasitic wasp, Habrobracon hebetor (Say) (Hymenoptera: Braconidae), a cosmopolitan species commonly used in biological control against a wide range of both major lepidopterous pests of stored products and field crops in different parts of the world. Three multiplex PCR sets were optimised and characterised across 46 H. hebetor specimens from two samples collected from millet fields in Niger. Two to 11 alleles were found per locus and observed heterozygosity ranged from 0.289 to 0.826. Polymorphism was detected in both samples with a similar level of observed heterozygosity (0.482 vs. 0.502) and number of alleles (4.1 vs. 3.6). Deviation from Hardy-Weinberg equilibrium was detected at the same five loci in both samples and five or seven more loci in each sample but was not associated with heterozygote deficiencies. Even though evidence for linkage disequilibrium was found between a few alleles, these new loci segregated independently. The variability of the 22 loci will enable estimates of genetic diversity and structure patterns, as well as gene flow between H. hebetor populations at different spatial scales. Cross-species amplifications were successful among the six Bracon spp. tested and nine loci will be particularly appropriate for population genetic studies in B. brevicornis. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/582337/1/Benoit-European%20Journal%20of%20Entomology-2016-113%20pp265-269.pdf text Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.14411/eje.2016.031 10.14411/eje.2016.031 info:eu-repo/semantics/altIdentifier/doi/10.14411/eje.2016.031 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.14411/eje.2016.031
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic H10 - Ravageurs des plantes
J11 - Manutention, transport, stockage et conservation des produits d'origine végétale
polymorphisme génétique
lutte antiparasite en entreposage
locus
microsatellite
variation génétique
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_7432
http://aims.fao.org/aos/agrovoc/c_24869
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_15975
H10 - Ravageurs des plantes
J11 - Manutention, transport, stockage et conservation des produits d'origine végétale
polymorphisme génétique
lutte antiparasite en entreposage
locus
microsatellite
variation génétique
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_7432
http://aims.fao.org/aos/agrovoc/c_24869
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_15975
spellingShingle H10 - Ravageurs des plantes
J11 - Manutention, transport, stockage et conservation des produits d'origine végétale
polymorphisme génétique
lutte antiparasite en entreposage
locus
microsatellite
variation génétique
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_7432
http://aims.fao.org/aos/agrovoc/c_24869
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_15975
H10 - Ravageurs des plantes
J11 - Manutention, transport, stockage et conservation des produits d'origine végétale
polymorphisme génétique
lutte antiparasite en entreposage
locus
microsatellite
variation génétique
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_7432
http://aims.fao.org/aos/agrovoc/c_24869
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_15975
Garba, Madougou
Loiseau, Anne
Benoit, Laure
Gauthier, Nathalie
A new suite of twenty-two polymorphic microsatellite loci in the parasitic wasp, Habrobracon hebetor (Hymenoptera: Braconidae): Promising molecular tools for studying the population genetics of several beneficial braconid species
description Combining a biotin-enrichment protocol and 454GS-FLX titanium pyrosequencing technology, we characterised 22 polymorphic microsatellite loci from the parasitic wasp, Habrobracon hebetor (Say) (Hymenoptera: Braconidae), a cosmopolitan species commonly used in biological control against a wide range of both major lepidopterous pests of stored products and field crops in different parts of the world. Three multiplex PCR sets were optimised and characterised across 46 H. hebetor specimens from two samples collected from millet fields in Niger. Two to 11 alleles were found per locus and observed heterozygosity ranged from 0.289 to 0.826. Polymorphism was detected in both samples with a similar level of observed heterozygosity (0.482 vs. 0.502) and number of alleles (4.1 vs. 3.6). Deviation from Hardy-Weinberg equilibrium was detected at the same five loci in both samples and five or seven more loci in each sample but was not associated with heterozygote deficiencies. Even though evidence for linkage disequilibrium was found between a few alleles, these new loci segregated independently. The variability of the 22 loci will enable estimates of genetic diversity and structure patterns, as well as gene flow between H. hebetor populations at different spatial scales. Cross-species amplifications were successful among the six Bracon spp. tested and nine loci will be particularly appropriate for population genetic studies in B. brevicornis.
format article
topic_facet H10 - Ravageurs des plantes
J11 - Manutention, transport, stockage et conservation des produits d'origine végétale
polymorphisme génétique
lutte antiparasite en entreposage
locus
microsatellite
variation génétique
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_7432
http://aims.fao.org/aos/agrovoc/c_24869
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_15975
author Garba, Madougou
Loiseau, Anne
Benoit, Laure
Gauthier, Nathalie
author_facet Garba, Madougou
Loiseau, Anne
Benoit, Laure
Gauthier, Nathalie
author_sort Garba, Madougou
title A new suite of twenty-two polymorphic microsatellite loci in the parasitic wasp, Habrobracon hebetor (Hymenoptera: Braconidae): Promising molecular tools for studying the population genetics of several beneficial braconid species
title_short A new suite of twenty-two polymorphic microsatellite loci in the parasitic wasp, Habrobracon hebetor (Hymenoptera: Braconidae): Promising molecular tools for studying the population genetics of several beneficial braconid species
title_full A new suite of twenty-two polymorphic microsatellite loci in the parasitic wasp, Habrobracon hebetor (Hymenoptera: Braconidae): Promising molecular tools for studying the population genetics of several beneficial braconid species
title_fullStr A new suite of twenty-two polymorphic microsatellite loci in the parasitic wasp, Habrobracon hebetor (Hymenoptera: Braconidae): Promising molecular tools for studying the population genetics of several beneficial braconid species
title_full_unstemmed A new suite of twenty-two polymorphic microsatellite loci in the parasitic wasp, Habrobracon hebetor (Hymenoptera: Braconidae): Promising molecular tools for studying the population genetics of several beneficial braconid species
title_sort new suite of twenty-two polymorphic microsatellite loci in the parasitic wasp, habrobracon hebetor (hymenoptera: braconidae): promising molecular tools for studying the population genetics of several beneficial braconid species
url http://agritrop.cirad.fr/582337/
http://agritrop.cirad.fr/582337/1/Benoit-European%20Journal%20of%20Entomology-2016-113%20pp265-269.pdf
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