Development of microsatellite markers in Rhinanthus angustifolius and cross-species amplification

Fifteen polymorphic microsatellite loci were developed from an enriched genomic library of the annual plant Rhinanthus angustifolius and characterized using 36 individuals. These markers provided high polymorphism ranging from two to 15 alleles per locus. Four loci showed significant departure from Hardy-Weinberg equilibrium, probably because of the occurrence of null alleles. No significant linkage disequilibrium was detected between pairs of loci. Tests of cross-species transferability were performed on four congeners with a success rate of 100% in Rhinanthus minor, 93% in R. mediterraneus and R. glacialis, and 80% in R. alectorolophus. These microsatellite loci will be useful tools to study mating system, gene flow and hybridization in the genus Rhinanthus.

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Detalles Bibliográficos
Autores principales: Ducarme, V., Risterucci, Ange-Marie, Wesselingh, R.A.
Formato: article biblioteca
Idioma:eng
Materias:F30 - Génétique et amélioration des plantes, Orobanchaceae, microsatellite, marqueur génétique, identification, polymorphisme génétique, collection de matériel génétique, http://aims.fao.org/aos/agrovoc/c_5426, http://aims.fao.org/aos/agrovoc/c_36574, http://aims.fao.org/aos/agrovoc/c_24030, http://aims.fao.org/aos/agrovoc/c_3791, http://aims.fao.org/aos/agrovoc/c_24031, http://aims.fao.org/aos/agrovoc/c_36739,
Acceso en línea:http://agritrop.cirad.fr/543222/
http://agritrop.cirad.fr/543222/1/543222.pdf
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spelling dig-cirad-fr-5432222024-01-28T15:38:10Z http://agritrop.cirad.fr/543222/ http://agritrop.cirad.fr/543222/ Development of microsatellite markers in Rhinanthus angustifolius and cross-species amplification. Ducarme V., Risterucci Ange-Marie, Wesselingh R.A.. 2008. Molecular Ecology Resources, 8 (2) : 384-386.https://doi.org/10.1111/j.1471-8286.2007.01966.x <https://doi.org/10.1111/j.1471-8286.2007.01966.x> Development of microsatellite markers in Rhinanthus angustifolius and cross-species amplification Ducarme, V. Risterucci, Ange-Marie Wesselingh, R.A. eng 2008 Molecular Ecology Resources F30 - Génétique et amélioration des plantes Orobanchaceae microsatellite marqueur génétique identification polymorphisme génétique collection de matériel génétique http://aims.fao.org/aos/agrovoc/c_5426 http://aims.fao.org/aos/agrovoc/c_36574 http://aims.fao.org/aos/agrovoc/c_24030 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_24031 http://aims.fao.org/aos/agrovoc/c_36739 Fifteen polymorphic microsatellite loci were developed from an enriched genomic library of the annual plant Rhinanthus angustifolius and characterized using 36 individuals. These markers provided high polymorphism ranging from two to 15 alleles per locus. Four loci showed significant departure from Hardy-Weinberg equilibrium, probably because of the occurrence of null alleles. No significant linkage disequilibrium was detected between pairs of loci. Tests of cross-species transferability were performed on four congeners with a success rate of 100% in Rhinanthus minor, 93% in R. mediterraneus and R. glacialis, and 80% in R. alectorolophus. These microsatellite loci will be useful tools to study mating system, gene flow and hybridization in the genus Rhinanthus. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/543222/1/543222.pdf text Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1111/j.1471-8286.2007.01966.x 10.1111/j.1471-8286.2007.01966.x http://catalogue-bibliotheques.cirad.fr/cgi-bin/koha/opac-detail.pl?biblionumber=199300 info:eu-repo/semantics/altIdentifier/doi/10.1111/j.1471-8286.2007.01966.x info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1111/j.1471-8286.2007.01966.x
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F30 - Génétique et amélioration des plantes
Orobanchaceae
microsatellite
marqueur génétique
identification
polymorphisme génétique
collection de matériel génétique
http://aims.fao.org/aos/agrovoc/c_5426
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_36739
F30 - Génétique et amélioration des plantes
Orobanchaceae
microsatellite
marqueur génétique
identification
polymorphisme génétique
collection de matériel génétique
http://aims.fao.org/aos/agrovoc/c_5426
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_36739
spellingShingle F30 - Génétique et amélioration des plantes
Orobanchaceae
microsatellite
marqueur génétique
identification
polymorphisme génétique
collection de matériel génétique
http://aims.fao.org/aos/agrovoc/c_5426
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_36739
F30 - Génétique et amélioration des plantes
Orobanchaceae
microsatellite
marqueur génétique
identification
polymorphisme génétique
collection de matériel génétique
http://aims.fao.org/aos/agrovoc/c_5426
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_36739
Ducarme, V.
Risterucci, Ange-Marie
Wesselingh, R.A.
Development of microsatellite markers in Rhinanthus angustifolius and cross-species amplification
description Fifteen polymorphic microsatellite loci were developed from an enriched genomic library of the annual plant Rhinanthus angustifolius and characterized using 36 individuals. These markers provided high polymorphism ranging from two to 15 alleles per locus. Four loci showed significant departure from Hardy-Weinberg equilibrium, probably because of the occurrence of null alleles. No significant linkage disequilibrium was detected between pairs of loci. Tests of cross-species transferability were performed on four congeners with a success rate of 100% in Rhinanthus minor, 93% in R. mediterraneus and R. glacialis, and 80% in R. alectorolophus. These microsatellite loci will be useful tools to study mating system, gene flow and hybridization in the genus Rhinanthus.
format article
topic_facet F30 - Génétique et amélioration des plantes
Orobanchaceae
microsatellite
marqueur génétique
identification
polymorphisme génétique
collection de matériel génétique
http://aims.fao.org/aos/agrovoc/c_5426
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_36739
author Ducarme, V.
Risterucci, Ange-Marie
Wesselingh, R.A.
author_facet Ducarme, V.
Risterucci, Ange-Marie
Wesselingh, R.A.
author_sort Ducarme, V.
title Development of microsatellite markers in Rhinanthus angustifolius and cross-species amplification
title_short Development of microsatellite markers in Rhinanthus angustifolius and cross-species amplification
title_full Development of microsatellite markers in Rhinanthus angustifolius and cross-species amplification
title_fullStr Development of microsatellite markers in Rhinanthus angustifolius and cross-species amplification
title_full_unstemmed Development of microsatellite markers in Rhinanthus angustifolius and cross-species amplification
title_sort development of microsatellite markers in rhinanthus angustifolius and cross-species amplification
url http://agritrop.cirad.fr/543222/
http://agritrop.cirad.fr/543222/1/543222.pdf
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