Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata

A genomic library from the commercial diploid cultivar 'Ouro' (Musa acuminata), enriched for CT- and GT-repeats, was used to isolate and characterize 23 microsatellite loci. These loci were tested in 10 Musa genotypes, representing various Musa genomic groups with distinct ploidy level. The number of alleles per locus ranged from one to seven, and 20 loci were highly informative. Four loci appeared to amplify B genome-specific alleles, while three loci seemed to be absent in the B genome. The polymorphism revealed by these loci will be extremely useful for genetic mapping, marker-assisted selection, germplasm characterization and evolutionary studies in Musa.

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Main Authors: Creste, Silvana, Benatti, Thiago R., Orsi, Myrian R., Risterucci, Ange-Marie, Figueira, Antonio
Format: article biblioteca
Language:eng
Subjects:F30 - Génétique et amélioration des plantes, Musa acuminata, microsatellite, marqueur génétique, locus, identification, polymorphisme génétique, banque de données, http://aims.fao.org/aos/agrovoc/c_4994, http://aims.fao.org/aos/agrovoc/c_36574, http://aims.fao.org/aos/agrovoc/c_24030, http://aims.fao.org/aos/agrovoc/c_24869, http://aims.fao.org/aos/agrovoc/c_3791, http://aims.fao.org/aos/agrovoc/c_24031, http://aims.fao.org/aos/agrovoc/c_24833,
Online Access:http://agritrop.cirad.fr/533707/
http://agritrop.cirad.fr/533707/1/document_533707.pdf
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spelling dig-cirad-fr-5337072024-01-28T14:46:16Z http://agritrop.cirad.fr/533707/ http://agritrop.cirad.fr/533707/ Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata. Creste Silvana, Benatti Thiago R., Orsi Myrian R., Risterucci Ange-Marie, Figueira Antonio. 2006. Molecular Ecology Notes, 6 : 303-306.https://doi.org/10.1111/j.1471-8286.2005.01209.x <https://doi.org/10.1111/j.1471-8286.2005.01209.x> Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata Creste, Silvana Benatti, Thiago R. Orsi, Myrian R. Risterucci, Ange-Marie Figueira, Antonio eng 2006 Molecular Ecology Notes F30 - Génétique et amélioration des plantes Musa acuminata microsatellite marqueur génétique locus identification polymorphisme génétique banque de données http://aims.fao.org/aos/agrovoc/c_4994 http://aims.fao.org/aos/agrovoc/c_36574 http://aims.fao.org/aos/agrovoc/c_24030 http://aims.fao.org/aos/agrovoc/c_24869 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_24031 http://aims.fao.org/aos/agrovoc/c_24833 A genomic library from the commercial diploid cultivar 'Ouro' (Musa acuminata), enriched for CT- and GT-repeats, was used to isolate and characterize 23 microsatellite loci. These loci were tested in 10 Musa genotypes, representing various Musa genomic groups with distinct ploidy level. The number of alleles per locus ranged from one to seven, and 20 loci were highly informative. Four loci appeared to amplify B genome-specific alleles, while three loci seemed to be absent in the B genome. The polymorphism revealed by these loci will be extremely useful for genetic mapping, marker-assisted selection, germplasm characterization and evolutionary studies in Musa. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/533707/1/document_533707.pdf application/pdf Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1111/j.1471-8286.2005.01209.x 10.1111/j.1471-8286.2005.01209.x info:eu-repo/semantics/altIdentifier/doi/10.1111/j.1471-8286.2005.01209.x info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1111/j.1471-8286.2005.01209.x info:eu-repo/semantics/reference/purl/http://www.blackwell-synergy.com/doi/abs/10.1111/j.1471-8286.2005.01209.x
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F30 - Génétique et amélioration des plantes
Musa acuminata
microsatellite
marqueur génétique
locus
identification
polymorphisme génétique
banque de données
http://aims.fao.org/aos/agrovoc/c_4994
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_24869
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_24833
F30 - Génétique et amélioration des plantes
Musa acuminata
microsatellite
marqueur génétique
locus
identification
polymorphisme génétique
banque de données
http://aims.fao.org/aos/agrovoc/c_4994
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_24869
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_24833
spellingShingle F30 - Génétique et amélioration des plantes
Musa acuminata
microsatellite
marqueur génétique
locus
identification
polymorphisme génétique
banque de données
http://aims.fao.org/aos/agrovoc/c_4994
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_24869
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_24833
F30 - Génétique et amélioration des plantes
Musa acuminata
microsatellite
marqueur génétique
locus
identification
polymorphisme génétique
banque de données
http://aims.fao.org/aos/agrovoc/c_4994
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_24869
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_24833
Creste, Silvana
Benatti, Thiago R.
Orsi, Myrian R.
Risterucci, Ange-Marie
Figueira, Antonio
Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata
description A genomic library from the commercial diploid cultivar 'Ouro' (Musa acuminata), enriched for CT- and GT-repeats, was used to isolate and characterize 23 microsatellite loci. These loci were tested in 10 Musa genotypes, representing various Musa genomic groups with distinct ploidy level. The number of alleles per locus ranged from one to seven, and 20 loci were highly informative. Four loci appeared to amplify B genome-specific alleles, while three loci seemed to be absent in the B genome. The polymorphism revealed by these loci will be extremely useful for genetic mapping, marker-assisted selection, germplasm characterization and evolutionary studies in Musa.
format article
topic_facet F30 - Génétique et amélioration des plantes
Musa acuminata
microsatellite
marqueur génétique
locus
identification
polymorphisme génétique
banque de données
http://aims.fao.org/aos/agrovoc/c_4994
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_24869
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_24833
author Creste, Silvana
Benatti, Thiago R.
Orsi, Myrian R.
Risterucci, Ange-Marie
Figueira, Antonio
author_facet Creste, Silvana
Benatti, Thiago R.
Orsi, Myrian R.
Risterucci, Ange-Marie
Figueira, Antonio
author_sort Creste, Silvana
title Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata
title_short Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata
title_full Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata
title_fullStr Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata
title_full_unstemmed Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata
title_sort isolation and characterization of microsatellite loci from a commercial cultivar of musa acuminata
url http://agritrop.cirad.fr/533707/
http://agritrop.cirad.fr/533707/1/document_533707.pdf
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AT benattithiagor isolationandcharacterizationofmicrosatellitelocifromacommercialcultivarofmusaacuminata
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