Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata
A genomic library from the commercial diploid cultivar 'Ouro' (Musa acuminata), enriched for CT- and GT-repeats, was used to isolate and characterize 23 microsatellite loci. These loci were tested in 10 Musa genotypes, representing various Musa genomic groups with distinct ploidy level. The number of alleles per locus ranged from one to seven, and 20 loci were highly informative. Four loci appeared to amplify B genome-specific alleles, while three loci seemed to be absent in the B genome. The polymorphism revealed by these loci will be extremely useful for genetic mapping, marker-assisted selection, germplasm characterization and evolutionary studies in Musa.
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Subjects: | F30 - Génétique et amélioration des plantes, Musa acuminata, microsatellite, marqueur génétique, locus, identification, polymorphisme génétique, banque de données, http://aims.fao.org/aos/agrovoc/c_4994, http://aims.fao.org/aos/agrovoc/c_36574, http://aims.fao.org/aos/agrovoc/c_24030, http://aims.fao.org/aos/agrovoc/c_24869, http://aims.fao.org/aos/agrovoc/c_3791, http://aims.fao.org/aos/agrovoc/c_24031, http://aims.fao.org/aos/agrovoc/c_24833, |
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dig-cirad-fr-5337072024-01-28T14:46:16Z http://agritrop.cirad.fr/533707/ http://agritrop.cirad.fr/533707/ Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata. Creste Silvana, Benatti Thiago R., Orsi Myrian R., Risterucci Ange-Marie, Figueira Antonio. 2006. Molecular Ecology Notes, 6 : 303-306.https://doi.org/10.1111/j.1471-8286.2005.01209.x <https://doi.org/10.1111/j.1471-8286.2005.01209.x> Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata Creste, Silvana Benatti, Thiago R. Orsi, Myrian R. Risterucci, Ange-Marie Figueira, Antonio eng 2006 Molecular Ecology Notes F30 - Génétique et amélioration des plantes Musa acuminata microsatellite marqueur génétique locus identification polymorphisme génétique banque de données http://aims.fao.org/aos/agrovoc/c_4994 http://aims.fao.org/aos/agrovoc/c_36574 http://aims.fao.org/aos/agrovoc/c_24030 http://aims.fao.org/aos/agrovoc/c_24869 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_24031 http://aims.fao.org/aos/agrovoc/c_24833 A genomic library from the commercial diploid cultivar 'Ouro' (Musa acuminata), enriched for CT- and GT-repeats, was used to isolate and characterize 23 microsatellite loci. These loci were tested in 10 Musa genotypes, representing various Musa genomic groups with distinct ploidy level. The number of alleles per locus ranged from one to seven, and 20 loci were highly informative. Four loci appeared to amplify B genome-specific alleles, while three loci seemed to be absent in the B genome. The polymorphism revealed by these loci will be extremely useful for genetic mapping, marker-assisted selection, germplasm characterization and evolutionary studies in Musa. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/533707/1/document_533707.pdf application/pdf Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1111/j.1471-8286.2005.01209.x 10.1111/j.1471-8286.2005.01209.x info:eu-repo/semantics/altIdentifier/doi/10.1111/j.1471-8286.2005.01209.x info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1111/j.1471-8286.2005.01209.x info:eu-repo/semantics/reference/purl/http://www.blackwell-synergy.com/doi/abs/10.1111/j.1471-8286.2005.01209.x |
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F30 - Génétique et amélioration des plantes Musa acuminata microsatellite marqueur génétique locus identification polymorphisme génétique banque de données http://aims.fao.org/aos/agrovoc/c_4994 http://aims.fao.org/aos/agrovoc/c_36574 http://aims.fao.org/aos/agrovoc/c_24030 http://aims.fao.org/aos/agrovoc/c_24869 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_24031 http://aims.fao.org/aos/agrovoc/c_24833 F30 - Génétique et amélioration des plantes Musa acuminata microsatellite marqueur génétique locus identification polymorphisme génétique banque de données http://aims.fao.org/aos/agrovoc/c_4994 http://aims.fao.org/aos/agrovoc/c_36574 http://aims.fao.org/aos/agrovoc/c_24030 http://aims.fao.org/aos/agrovoc/c_24869 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_24031 http://aims.fao.org/aos/agrovoc/c_24833 |
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F30 - Génétique et amélioration des plantes Musa acuminata microsatellite marqueur génétique locus identification polymorphisme génétique banque de données http://aims.fao.org/aos/agrovoc/c_4994 http://aims.fao.org/aos/agrovoc/c_36574 http://aims.fao.org/aos/agrovoc/c_24030 http://aims.fao.org/aos/agrovoc/c_24869 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_24031 http://aims.fao.org/aos/agrovoc/c_24833 F30 - Génétique et amélioration des plantes Musa acuminata microsatellite marqueur génétique locus identification polymorphisme génétique banque de données http://aims.fao.org/aos/agrovoc/c_4994 http://aims.fao.org/aos/agrovoc/c_36574 http://aims.fao.org/aos/agrovoc/c_24030 http://aims.fao.org/aos/agrovoc/c_24869 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_24031 http://aims.fao.org/aos/agrovoc/c_24833 Creste, Silvana Benatti, Thiago R. Orsi, Myrian R. Risterucci, Ange-Marie Figueira, Antonio Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata |
description |
A genomic library from the commercial diploid cultivar 'Ouro' (Musa acuminata), enriched for CT- and GT-repeats, was used to isolate and characterize 23 microsatellite loci. These loci were tested in 10 Musa genotypes, representing various Musa genomic groups with distinct ploidy level. The number of alleles per locus ranged from one to seven, and 20 loci were highly informative. Four loci appeared to amplify B genome-specific alleles, while three loci seemed to be absent in the B genome. The polymorphism revealed by these loci will be extremely useful for genetic mapping, marker-assisted selection, germplasm characterization and evolutionary studies in Musa. |
format |
article |
topic_facet |
F30 - Génétique et amélioration des plantes Musa acuminata microsatellite marqueur génétique locus identification polymorphisme génétique banque de données http://aims.fao.org/aos/agrovoc/c_4994 http://aims.fao.org/aos/agrovoc/c_36574 http://aims.fao.org/aos/agrovoc/c_24030 http://aims.fao.org/aos/agrovoc/c_24869 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_24031 http://aims.fao.org/aos/agrovoc/c_24833 |
author |
Creste, Silvana Benatti, Thiago R. Orsi, Myrian R. Risterucci, Ange-Marie Figueira, Antonio |
author_facet |
Creste, Silvana Benatti, Thiago R. Orsi, Myrian R. Risterucci, Ange-Marie Figueira, Antonio |
author_sort |
Creste, Silvana |
title |
Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata |
title_short |
Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata |
title_full |
Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata |
title_fullStr |
Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata |
title_full_unstemmed |
Isolation and characterization of microsatellite loci from a commercial cultivar of Musa acuminata |
title_sort |
isolation and characterization of microsatellite loci from a commercial cultivar of musa acuminata |
url |
http://agritrop.cirad.fr/533707/ http://agritrop.cirad.fr/533707/1/document_533707.pdf |
work_keys_str_mv |
AT crestesilvana isolationandcharacterizationofmicrosatellitelocifromacommercialcultivarofmusaacuminata AT benattithiagor isolationandcharacterizationofmicrosatellitelocifromacommercialcultivarofmusaacuminata AT orsimyrianr isolationandcharacterizationofmicrosatellitelocifromacommercialcultivarofmusaacuminata AT risterucciangemarie isolationandcharacterizationofmicrosatellitelocifromacommercialcultivarofmusaacuminata AT figueiraantonio isolationandcharacterizationofmicrosatellitelocifromacommercialcultivarofmusaacuminata |
_version_ |
1792496522133241856 |