A roadmap for gene functional characterisation in crops with large genomes: lessons from polyploid wheat
Understanding the function of genes within staple crops will accelerate crop improvement by allowing targeted breeding approaches. Despite their importance, a lack of genomic information and resources has hindered the functional characterisation of genes in major crops. The recent release of high-quality reference sequences for these crops underpins a suite of genetic and genomic resources that support basic research and breeding. For wheat, these include gene model annotations, expression atlases and gene networks that provide information about putative function. Sequenced mutant populations, improved transformation protocols and structured natural populations provide rapid methods to study gene function directly. We highlight a case study exemplifying how to integrate these resources. This review provides a helpful guide for plant scientists, especially those expanding into crop research, to capitalise on the discoveries made in Arabidopsis and other plants. This will accelerate the improvement of crops of vital importance for food and nutrition security.
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eLife Sciences Publications
2020
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Assuntos: | AGRICULTURAL SCIENCES AND BIOTECHNOLOGY, GENES, GENOMICS, CROPS, PLANT BREEDING, WHEAT, POLYPLOIDY, |
Acesso em linha: | https://hdl.handle.net/10883/21640 |
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dig-cimmyt-10883-216402023-02-20T14:52:56Z A roadmap for gene functional characterisation in crops with large genomes: lessons from polyploid wheat Adamski, N.M. Borrill, P. Brinton, J. Harrington, S.A. Marchal, C. Bentley, A.R. Bovill, W.D. Cattivelli, L. Cockram, J. Contreras-Moreira, B. Ford, B. Ghosh, S. Harwood, W. Hassani-Pak, K. Hayta, S. Hickey, L.T. Kanyuka, K. King, J. Maccaferri, M. Naamati, G. Pozniak, C.J. Ramirez-Gonzalez, R.H. Sansaloni, C.P. Trevaskis, B. Wingen, L.U. Wulff, B.B.H. Uauy, C. AGRICULTURAL SCIENCES AND BIOTECHNOLOGY GENES GENOMICS CROPS PLANT BREEDING WHEAT POLYPLOIDY Understanding the function of genes within staple crops will accelerate crop improvement by allowing targeted breeding approaches. Despite their importance, a lack of genomic information and resources has hindered the functional characterisation of genes in major crops. The recent release of high-quality reference sequences for these crops underpins a suite of genetic and genomic resources that support basic research and breeding. For wheat, these include gene model annotations, expression atlases and gene networks that provide information about putative function. Sequenced mutant populations, improved transformation protocols and structured natural populations provide rapid methods to study gene function directly. We highlight a case study exemplifying how to integrate these resources. This review provides a helpful guide for plant scientists, especially those expanding into crop research, to capitalise on the discoveries made in Arabidopsis and other plants. This will accelerate the improvement of crops of vital importance for food and nutrition security. 2021-09-11T00:10:15Z 2021-09-11T00:10:15Z 2020 Article Published Version https://hdl.handle.net/10883/21640 10.7554/eLife.55646 English CIMMYT manages Intellectual Assets as International Public Goods. The user is free to download, print, store and share this work. In case you want to translate or create any other derivative work and share or distribute such translation/derivative work, please contact CIMMYT-Knowledge-Center@cgiar.org indicating the work you want to use and the kind of use you intend; CIMMYT will contact you with the suitable license for that purpose Open Access Cambridge eLife Sciences Publications 9 2050-084X eLife e55646 |
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AGRICULTURAL SCIENCES AND BIOTECHNOLOGY GENES GENOMICS CROPS PLANT BREEDING WHEAT POLYPLOIDY AGRICULTURAL SCIENCES AND BIOTECHNOLOGY GENES GENOMICS CROPS PLANT BREEDING WHEAT POLYPLOIDY |
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AGRICULTURAL SCIENCES AND BIOTECHNOLOGY GENES GENOMICS CROPS PLANT BREEDING WHEAT POLYPLOIDY AGRICULTURAL SCIENCES AND BIOTECHNOLOGY GENES GENOMICS CROPS PLANT BREEDING WHEAT POLYPLOIDY Adamski, N.M. Borrill, P. Brinton, J. Harrington, S.A. Marchal, C. Bentley, A.R. Bovill, W.D. Cattivelli, L. Cockram, J. Contreras-Moreira, B. Ford, B. Ghosh, S. Harwood, W. Hassani-Pak, K. Hayta, S. Hickey, L.T. Kanyuka, K. King, J. Maccaferri, M. Naamati, G. Pozniak, C.J. Ramirez-Gonzalez, R.H. Sansaloni, C.P. Trevaskis, B. Wingen, L.U. Wulff, B.B.H. Uauy, C. A roadmap for gene functional characterisation in crops with large genomes: lessons from polyploid wheat |
description |
Understanding the function of genes within staple crops will accelerate crop improvement by allowing targeted breeding approaches. Despite their importance, a lack of genomic information and resources has hindered the functional characterisation of genes in major crops. The recent release of high-quality reference sequences for these crops underpins a suite of genetic and genomic resources that support basic research and breeding. For wheat, these include gene model annotations, expression atlases and gene networks that provide information about putative function. Sequenced mutant populations, improved transformation protocols and structured natural populations provide rapid methods to study gene function directly. We highlight a case study exemplifying how to integrate these resources. This review provides a helpful guide for plant scientists, especially those expanding into crop research, to capitalise on the discoveries made in Arabidopsis and other plants. This will accelerate the improvement of crops of vital importance for food and nutrition security. |
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AGRICULTURAL SCIENCES AND BIOTECHNOLOGY GENES GENOMICS CROPS PLANT BREEDING WHEAT POLYPLOIDY |
author |
Adamski, N.M. Borrill, P. Brinton, J. Harrington, S.A. Marchal, C. Bentley, A.R. Bovill, W.D. Cattivelli, L. Cockram, J. Contreras-Moreira, B. Ford, B. Ghosh, S. Harwood, W. Hassani-Pak, K. Hayta, S. Hickey, L.T. Kanyuka, K. King, J. Maccaferri, M. Naamati, G. Pozniak, C.J. Ramirez-Gonzalez, R.H. Sansaloni, C.P. Trevaskis, B. Wingen, L.U. Wulff, B.B.H. Uauy, C. |
author_facet |
Adamski, N.M. Borrill, P. Brinton, J. Harrington, S.A. Marchal, C. Bentley, A.R. Bovill, W.D. Cattivelli, L. Cockram, J. Contreras-Moreira, B. Ford, B. Ghosh, S. Harwood, W. Hassani-Pak, K. Hayta, S. Hickey, L.T. Kanyuka, K. King, J. Maccaferri, M. Naamati, G. Pozniak, C.J. Ramirez-Gonzalez, R.H. Sansaloni, C.P. Trevaskis, B. Wingen, L.U. Wulff, B.B.H. Uauy, C. |
author_sort |
Adamski, N.M. |
title |
A roadmap for gene functional characterisation in crops with large genomes: lessons from polyploid wheat |
title_short |
A roadmap for gene functional characterisation in crops with large genomes: lessons from polyploid wheat |
title_full |
A roadmap for gene functional characterisation in crops with large genomes: lessons from polyploid wheat |
title_fullStr |
A roadmap for gene functional characterisation in crops with large genomes: lessons from polyploid wheat |
title_full_unstemmed |
A roadmap for gene functional characterisation in crops with large genomes: lessons from polyploid wheat |
title_sort |
roadmap for gene functional characterisation in crops with large genomes: lessons from polyploid wheat |
publisher |
eLife Sciences Publications |
publishDate |
2020 |
url |
https://hdl.handle.net/10883/21640 |
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