Re-defining the yam (Dioscorea spp.) core collection using morphological traits

Development of core collection representing the diversity in the entire germplasm creates a better access and enhanced utilization of the main collection thus allowing rapid evaluation in crop improvement programs. Core collections are dynamic in nature and needs revisiting when additional germplasm and information becomes available. In the current study, an attempt was made to re-define the previously developed yam (Dioscorea spp) core collection using 56 morphological traits. Information on additional acquired germplasm and presence of duplicates or mislabelled accessions in the entire collection was also used. The re-defined core collection consisted of 843 accessions and represented about 20% of the entire collection. It included six Dioscorea species, of which accessions of Dioscorea rotundata are in the majority (73.54%) followed by Dioscorea alata (21.35%), Dioscorea bulbifera (1.66%), Dioscorea cayenensis (1.42%), Dioscorea dumetorum (1.42%) and Dioscorea esculenta (0.59%). The Shannon weaver diversity index and principal component analysis revealed the maximum diversity captured in the core from the base collection. This re-defined core collection is more valuable than the original core since it represents true-to-type accessions ensuring reliability for enhanced utilization of germplasm in yam improvement programs.

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Bibliographic Details
Main Authors: Girma Tessema, G., Bhattacharjee, Ranjana, López Montes, Antonio José, Gueye, B., Ofodile, S., Franco, J., Abberton, Michael T.
Format: Journal Article biblioteca
Language:English
Published: Cambridge University Press 2017-05-03
Subjects:dioscorea, yams, core collection, morphological traits, phenotypic diversity, genetics,
Online Access:https://hdl.handle.net/10568/81242
https://doi.org/10.1017/S1479262117000144
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spelling dig-cgspace-10568-812422023-12-27T19:28:49Z Re-defining the yam (Dioscorea spp.) core collection using morphological traits Girma Tessema, G. Bhattacharjee, Ranjana López Montes, Antonio José Gueye, B. Ofodile, S. Franco, J. Abberton, Michael T. dioscorea yams core collection morphological traits phenotypic diversity genetics Development of core collection representing the diversity in the entire germplasm creates a better access and enhanced utilization of the main collection thus allowing rapid evaluation in crop improvement programs. Core collections are dynamic in nature and needs revisiting when additional germplasm and information becomes available. In the current study, an attempt was made to re-define the previously developed yam (Dioscorea spp) core collection using 56 morphological traits. Information on additional acquired germplasm and presence of duplicates or mislabelled accessions in the entire collection was also used. The re-defined core collection consisted of 843 accessions and represented about 20% of the entire collection. It included six Dioscorea species, of which accessions of Dioscorea rotundata are in the majority (73.54%) followed by Dioscorea alata (21.35%), Dioscorea bulbifera (1.66%), Dioscorea cayenensis (1.42%), Dioscorea dumetorum (1.42%) and Dioscorea esculenta (0.59%). The Shannon weaver diversity index and principal component analysis revealed the maximum diversity captured in the core from the base collection. This re-defined core collection is more valuable than the original core since it represents true-to-type accessions ensuring reliability for enhanced utilization of germplasm in yam improvement programs. 2017-05-03 2017-05-30T09:18:08Z 2017-05-30T09:18:08Z Journal Article Girma Tessema, G., Bhattacharjee, R., Lopez-Montes, A., Gueye, B., Ofodile, S., Franco, J. & Abberton, M. (2017). Re-defining the yam (Dioscorea spp.) core collection using morphological traits. Plant Genetic Resources-Characterization and Utilization, 1-8. 1479-2621 https://hdl.handle.net/10568/81242 https://doi.org/10.1017/S1479262117000144 en Limited Access p. 193-200 Cambridge University Press Plant Genetic Resources: Characterization and Utilization
institution CGIAR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cgspace
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CGIAR
language English
topic dioscorea
yams
core collection
morphological traits
phenotypic diversity
genetics
dioscorea
yams
core collection
morphological traits
phenotypic diversity
genetics
spellingShingle dioscorea
yams
core collection
morphological traits
phenotypic diversity
genetics
dioscorea
yams
core collection
morphological traits
phenotypic diversity
genetics
Girma Tessema, G.
Bhattacharjee, Ranjana
López Montes, Antonio José
Gueye, B.
Ofodile, S.
Franco, J.
Abberton, Michael T.
Re-defining the yam (Dioscorea spp.) core collection using morphological traits
description Development of core collection representing the diversity in the entire germplasm creates a better access and enhanced utilization of the main collection thus allowing rapid evaluation in crop improvement programs. Core collections are dynamic in nature and needs revisiting when additional germplasm and information becomes available. In the current study, an attempt was made to re-define the previously developed yam (Dioscorea spp) core collection using 56 morphological traits. Information on additional acquired germplasm and presence of duplicates or mislabelled accessions in the entire collection was also used. The re-defined core collection consisted of 843 accessions and represented about 20% of the entire collection. It included six Dioscorea species, of which accessions of Dioscorea rotundata are in the majority (73.54%) followed by Dioscorea alata (21.35%), Dioscorea bulbifera (1.66%), Dioscorea cayenensis (1.42%), Dioscorea dumetorum (1.42%) and Dioscorea esculenta (0.59%). The Shannon weaver diversity index and principal component analysis revealed the maximum diversity captured in the core from the base collection. This re-defined core collection is more valuable than the original core since it represents true-to-type accessions ensuring reliability for enhanced utilization of germplasm in yam improvement programs.
format Journal Article
topic_facet dioscorea
yams
core collection
morphological traits
phenotypic diversity
genetics
author Girma Tessema, G.
Bhattacharjee, Ranjana
López Montes, Antonio José
Gueye, B.
Ofodile, S.
Franco, J.
Abberton, Michael T.
author_facet Girma Tessema, G.
Bhattacharjee, Ranjana
López Montes, Antonio José
Gueye, B.
Ofodile, S.
Franco, J.
Abberton, Michael T.
author_sort Girma Tessema, G.
title Re-defining the yam (Dioscorea spp.) core collection using morphological traits
title_short Re-defining the yam (Dioscorea spp.) core collection using morphological traits
title_full Re-defining the yam (Dioscorea spp.) core collection using morphological traits
title_fullStr Re-defining the yam (Dioscorea spp.) core collection using morphological traits
title_full_unstemmed Re-defining the yam (Dioscorea spp.) core collection using morphological traits
title_sort re-defining the yam (dioscorea spp.) core collection using morphological traits
publisher Cambridge University Press
publishDate 2017-05-03
url https://hdl.handle.net/10568/81242
https://doi.org/10.1017/S1479262117000144
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