The genome of the blood fluke Schistosoma mansoni

Schistosoma mansoni is responsible for the neglected tropical disease schistosomiasis that affects 210 million people in 76 countries. Here we present analysis of the 363 megabase nuclear genome of the blood fluke. It encodes at least 11,809 genes, with an unusual intron size distribution, and new families of micro-exon genes that undergo frequent alternative splicing. As the first sequenced flatworm, and a representative of the Lophotrochozoa, it offers insights into early events in the evolution of the animals, including the development of a body pattern with bilateral symmetry, and the development of tissues into organs. Our analysis has been informed by the need to find new drug targets. The deficits in lipid metabolism that make schistosomes dependent on the host are revealed, and the identification of membrane receptors, ion channels and more than 300 proteases provide new insights into the biology of the life cycle and new targets. Bioinformatics approaches have identified metabolic chokepoints, and a chemogenomic screen has pinpointed schistosome proteins for which existing drugs may be active. The information generated provides an invaluable resource for the research community to develop much needed new control tools for the treatment and eradication of this important and neglected disease.

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Main Authors: Berriman, M., Haas, B.J., LoVerde, P.T., Wilson, R.A., Dillon, G.P., Cerqueira, G.C., Mashiyama, S.T., Al-Lazikani, B., Andrade, L.F., Ashton, P.D., Aslett, M.A., Bartholomeu, D.C., Blandin, G., Caffrey, C.R., Coghlan, A., Coulson, R., Day, T.A., Delcher, A., DeMarco, R., Djikeng, Appolinaire, Eyre, T., Gamble, J.A., Ghedin, E., Gu, Y., Hertz-Fowler, C., Hirai, H., Hirai, Y., Houston, R., Ivens, A., Johnston, D.A., Lacerda, D., Macedo, C.D., McVeigh, P., Ning, Z., Oliveira, G., Overington, J.P., Parkhill, J., Pertea, M., Pierce, R.J., Protasio, A.V., Quail, M.A., Rajandream, M.A., Rogers, J., Sajid, M., Salzberg, S.L., Stanke, M., Tivey, A.R., White, O., Williams, D.L., Wortman, J., Wu, W., Zamanian, M., Zerlotini, A., Fraser-Liggett, C.M., Barrell, B.G., El-Sayed, N.M.
Format: Journal Article biblioteca
Language:English
Published: Springer 2009-07
Subjects:schistosoma, health,
Online Access:https://hdl.handle.net/10568/68366
https://doi.org/10.1038/nature08160
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spelling dig-cgspace-10568-683662023-12-08T19:36:04Z The genome of the blood fluke Schistosoma mansoni Berriman, M. Haas, B.J. LoVerde, P.T. Wilson, R.A. Dillon, G.P. Cerqueira, G.C. Mashiyama, S.T. Al-Lazikani, B. Andrade, L.F. Ashton, P.D. Aslett, M.A. Bartholomeu, D.C. Blandin, G. Caffrey, C.R. Coghlan, A. Coulson, R. Day, T.A. Delcher, A. DeMarco, R. Djikeng, Appolinaire Eyre, T. Gamble, J.A. Ghedin, E. Gu, Y. Hertz-Fowler, C. Hirai, H. Hirai, Y. Houston, R. Ivens, A. Johnston, D.A. Lacerda, D. Macedo, C.D. McVeigh, P. Ning, Z. Oliveira, G. Overington, J.P. Parkhill, J. Pertea, M. Pierce, R.J. Protasio, A.V. Quail, M.A. Rajandream, M.A. Rogers, J. Sajid, M. Salzberg, S.L. Stanke, M. Tivey, A.R. White, O. Williams, D.L. Wortman, J. Wu, W. Zamanian, M. Zerlotini, A. Fraser-Liggett, C.M. Barrell, B.G. El-Sayed, N.M. schistosoma health Schistosoma mansoni is responsible for the neglected tropical disease schistosomiasis that affects 210 million people in 76 countries. Here we present analysis of the 363 megabase nuclear genome of the blood fluke. It encodes at least 11,809 genes, with an unusual intron size distribution, and new families of micro-exon genes that undergo frequent alternative splicing. As the first sequenced flatworm, and a representative of the Lophotrochozoa, it offers insights into early events in the evolution of the animals, including the development of a body pattern with bilateral symmetry, and the development of tissues into organs. Our analysis has been informed by the need to find new drug targets. The deficits in lipid metabolism that make schistosomes dependent on the host are revealed, and the identification of membrane receptors, ion channels and more than 300 proteases provide new insights into the biology of the life cycle and new targets. Bioinformatics approaches have identified metabolic chokepoints, and a chemogenomic screen has pinpointed schistosome proteins for which existing drugs may be active. The information generated provides an invaluable resource for the research community to develop much needed new control tools for the treatment and eradication of this important and neglected disease. 2009-07 2015-09-30T10:55:55Z 2015-09-30T10:55:55Z Journal Article Berriman, M., Haas, B.J., LoVerde, P.T., Wilson, R.A., Dillon, G.P., Cerqueira, G.C., Mashiyama, S.T., Al-Lazikani, B., Andrade, L.F., Ashton, P.D., Aslett, M.A., Bartholomeu, D.C., Blandin, G., Caffrey, C.R., Coghlan, A., Coulson, R., Day, T.A., Delcher, A., DeMarco, R., Djikeng, A., Eyre, T., Gamble, J.A., Ghedin, E., Gu, Y., Hertz-Fowler, C., Hirai, H., Hirai Y, Houston R, Ivens A, Johnston DA, Lacerda D, Macedo CD, McVeigh P, Ning, Z., Oliveira, G., Overington, J.P., Parkhill, J., Pertea, M., Pierce, R.J., Protasio, A.V., Quail, M.A., Rajandream, M.A., Rogers, J., Sajid, M., Salzberg, S.L., Stanke, M., Tivey, A.R., White, O., Williams, D.L., Wortman, J., Wu, W., Zamanian, M., Zerlotini, A., Fraser-Liggett, C.M., Barrell, B.G. and El-Sayed, N.M. 2009. The genome of the blood fluke Schistosoma mansoni. Nature 460:352-358. 0028-0836 https://hdl.handle.net/10568/68366 https://doi.org/10.1038/nature08160 en CC-BY-NC-SA-3.0 Open Access Springer Nature
institution CGIAR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cgspace
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CGIAR
language English
topic schistosoma
health
schistosoma
health
spellingShingle schistosoma
health
schistosoma
health
Berriman, M.
Haas, B.J.
LoVerde, P.T.
Wilson, R.A.
Dillon, G.P.
Cerqueira, G.C.
Mashiyama, S.T.
Al-Lazikani, B.
Andrade, L.F.
Ashton, P.D.
Aslett, M.A.
Bartholomeu, D.C.
Blandin, G.
Caffrey, C.R.
Coghlan, A.
Coulson, R.
Day, T.A.
Delcher, A.
DeMarco, R.
Djikeng, Appolinaire
Eyre, T.
Gamble, J.A.
Ghedin, E.
Gu, Y.
Hertz-Fowler, C.
Hirai, H.
Hirai, Y.
Houston, R.
Ivens, A.
Johnston, D.A.
Lacerda, D.
Macedo, C.D.
McVeigh, P.
Ning, Z.
Oliveira, G.
Overington, J.P.
Parkhill, J.
Pertea, M.
Pierce, R.J.
Protasio, A.V.
Quail, M.A.
Rajandream, M.A.
Rogers, J.
Sajid, M.
Salzberg, S.L.
Stanke, M.
Tivey, A.R.
White, O.
Williams, D.L.
Wortman, J.
Wu, W.
Zamanian, M.
Zerlotini, A.
Fraser-Liggett, C.M.
Barrell, B.G.
El-Sayed, N.M.
The genome of the blood fluke Schistosoma mansoni
description Schistosoma mansoni is responsible for the neglected tropical disease schistosomiasis that affects 210 million people in 76 countries. Here we present analysis of the 363 megabase nuclear genome of the blood fluke. It encodes at least 11,809 genes, with an unusual intron size distribution, and new families of micro-exon genes that undergo frequent alternative splicing. As the first sequenced flatworm, and a representative of the Lophotrochozoa, it offers insights into early events in the evolution of the animals, including the development of a body pattern with bilateral symmetry, and the development of tissues into organs. Our analysis has been informed by the need to find new drug targets. The deficits in lipid metabolism that make schistosomes dependent on the host are revealed, and the identification of membrane receptors, ion channels and more than 300 proteases provide new insights into the biology of the life cycle and new targets. Bioinformatics approaches have identified metabolic chokepoints, and a chemogenomic screen has pinpointed schistosome proteins for which existing drugs may be active. The information generated provides an invaluable resource for the research community to develop much needed new control tools for the treatment and eradication of this important and neglected disease.
format Journal Article
topic_facet schistosoma
health
author Berriman, M.
Haas, B.J.
LoVerde, P.T.
Wilson, R.A.
Dillon, G.P.
Cerqueira, G.C.
Mashiyama, S.T.
Al-Lazikani, B.
Andrade, L.F.
Ashton, P.D.
Aslett, M.A.
Bartholomeu, D.C.
Blandin, G.
Caffrey, C.R.
Coghlan, A.
Coulson, R.
Day, T.A.
Delcher, A.
DeMarco, R.
Djikeng, Appolinaire
Eyre, T.
Gamble, J.A.
Ghedin, E.
Gu, Y.
Hertz-Fowler, C.
Hirai, H.
Hirai, Y.
Houston, R.
Ivens, A.
Johnston, D.A.
Lacerda, D.
Macedo, C.D.
McVeigh, P.
Ning, Z.
Oliveira, G.
Overington, J.P.
Parkhill, J.
Pertea, M.
Pierce, R.J.
Protasio, A.V.
Quail, M.A.
Rajandream, M.A.
Rogers, J.
Sajid, M.
Salzberg, S.L.
Stanke, M.
Tivey, A.R.
White, O.
Williams, D.L.
Wortman, J.
Wu, W.
Zamanian, M.
Zerlotini, A.
Fraser-Liggett, C.M.
Barrell, B.G.
El-Sayed, N.M.
author_facet Berriman, M.
Haas, B.J.
LoVerde, P.T.
Wilson, R.A.
Dillon, G.P.
Cerqueira, G.C.
Mashiyama, S.T.
Al-Lazikani, B.
Andrade, L.F.
Ashton, P.D.
Aslett, M.A.
Bartholomeu, D.C.
Blandin, G.
Caffrey, C.R.
Coghlan, A.
Coulson, R.
Day, T.A.
Delcher, A.
DeMarco, R.
Djikeng, Appolinaire
Eyre, T.
Gamble, J.A.
Ghedin, E.
Gu, Y.
Hertz-Fowler, C.
Hirai, H.
Hirai, Y.
Houston, R.
Ivens, A.
Johnston, D.A.
Lacerda, D.
Macedo, C.D.
McVeigh, P.
Ning, Z.
Oliveira, G.
Overington, J.P.
Parkhill, J.
Pertea, M.
Pierce, R.J.
Protasio, A.V.
Quail, M.A.
Rajandream, M.A.
Rogers, J.
Sajid, M.
Salzberg, S.L.
Stanke, M.
Tivey, A.R.
White, O.
Williams, D.L.
Wortman, J.
Wu, W.
Zamanian, M.
Zerlotini, A.
Fraser-Liggett, C.M.
Barrell, B.G.
El-Sayed, N.M.
author_sort Berriman, M.
title The genome of the blood fluke Schistosoma mansoni
title_short The genome of the blood fluke Schistosoma mansoni
title_full The genome of the blood fluke Schistosoma mansoni
title_fullStr The genome of the blood fluke Schistosoma mansoni
title_full_unstemmed The genome of the blood fluke Schistosoma mansoni
title_sort genome of the blood fluke schistosoma mansoni
publisher Springer
publishDate 2009-07
url https://hdl.handle.net/10568/68366
https://doi.org/10.1038/nature08160
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