Mapping spatial distribution and geographic shifts of east African highland banana (Musa spp.) in Uganda

East African highland banana (Musa acuminata genome group AAA-EA; hereafter referred to as banana) is critical for Uganda’s food supply, hence our aim to map current distribution and to understand changes in banana production areas over the past five decades. We collected banana presence/absence data through an online survey based on high-resolution satellite images and coupled this data with independent covariates as inputs for ensemble machine learning prediction of current banana distribution. We assessed geographic shifts of production areas using spatially explicit differences between the 1958 and 2016 banana distribution maps. The biophysical factors associated with banana spatial distribution and geographic shift were determined using a logistic regression model and classification and regression tree, respectively. Ensemble models were superior (AUC = 0.895; 0.907) compared to their constituent algorithms trained with 12 and 17 covariates, respectively: random forests (AUC = 0.883; 0.901), gradient boosting machines (AUC = 0.878; 0.903), and neural networks (AUC = 0.870; 0.890). The logistic regression model (AUC = 0.879) performance was similar to that for the ensemble model and its constituent algorithms. In 2016, banana cultivation was concentrated in the western (44%) and central (36%) regions, while only a small proportion was in the eastern (18%) and northern (2%) regions. About 60% of increased cultivation since 1958 was in the western region; 50% of decreased cultivation in the eastern region; and 44% of continued cultivation in the central region. Soil organic carbon, soil pH, annual precipitation, slope gradient, bulk density and blue reflectance were associated with increased banana cultivation while precipitation seasonality and mean annual temperature were associated with decreased banana cultivation over the past 50 years. The maps of spatial distribution and geographic shift of banana can support targeting of context-specific intensification options and policy advocacy to avert agriculture driven environmental degradation.

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Main Authors: Ochola, D., Boekelo, B., Ven, G.W. van de, Taulya, G., Kubiriba, Jerome, Asten, Piet J.A. van, Giller, Ken E.
Format: Journal Article biblioteca
Language:English
Published: Public Library of Science 2022-02-17
Subjects:bananas, fruit crops, geography, machine learning, geographical distribution, crops, uganda,
Online Access:https://hdl.handle.net/10568/126738
https://doi.org/10.1371/journal.pone.0263439
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spelling dig-cgspace-10568-1267382023-12-08T19:36:04Z Mapping spatial distribution and geographic shifts of east African highland banana (Musa spp.) in Uganda Ochola, D. Boekelo, B. Ven, G.W. van de Taulya, G. Kubiriba, Jerome Asten, Piet J.A. van Giller, Ken E. bananas fruit crops geography machine learning geographical distribution crops uganda East African highland banana (Musa acuminata genome group AAA-EA; hereafter referred to as banana) is critical for Uganda’s food supply, hence our aim to map current distribution and to understand changes in banana production areas over the past five decades. We collected banana presence/absence data through an online survey based on high-resolution satellite images and coupled this data with independent covariates as inputs for ensemble machine learning prediction of current banana distribution. We assessed geographic shifts of production areas using spatially explicit differences between the 1958 and 2016 banana distribution maps. The biophysical factors associated with banana spatial distribution and geographic shift were determined using a logistic regression model and classification and regression tree, respectively. Ensemble models were superior (AUC = 0.895; 0.907) compared to their constituent algorithms trained with 12 and 17 covariates, respectively: random forests (AUC = 0.883; 0.901), gradient boosting machines (AUC = 0.878; 0.903), and neural networks (AUC = 0.870; 0.890). The logistic regression model (AUC = 0.879) performance was similar to that for the ensemble model and its constituent algorithms. In 2016, banana cultivation was concentrated in the western (44%) and central (36%) regions, while only a small proportion was in the eastern (18%) and northern (2%) regions. About 60% of increased cultivation since 1958 was in the western region; 50% of decreased cultivation in the eastern region; and 44% of continued cultivation in the central region. Soil organic carbon, soil pH, annual precipitation, slope gradient, bulk density and blue reflectance were associated with increased banana cultivation while precipitation seasonality and mean annual temperature were associated with decreased banana cultivation over the past 50 years. The maps of spatial distribution and geographic shift of banana can support targeting of context-specific intensification options and policy advocacy to avert agriculture driven environmental degradation. 2022-02-17 2023-01-10T10:52:53Z 2023-01-10T10:52:53Z Journal Article Ochola, D., Boekelo, B., van de Ven, G.W., Taulya, G., Kubiriba, J., van Asten, P. & Giller, K. (2022). Mapping spatial distribution and geographic shifts of east African highland banana (Musa spp.) in Uganda. PloS ONE, 17(2): 0263439, 1-28. 1932-6203 https://hdl.handle.net/10568/126738 https://doi.org/10.1371/journal.pone.0263439 NATURAL RESOURCE MANAGEMENT en CC-BY-4.0 Open Access 1-28 application/pdf Public Library of Science PLoS ONE
institution CGIAR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cgspace
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CGIAR
language English
topic bananas
fruit crops
geography
machine learning
geographical distribution
crops
uganda
bananas
fruit crops
geography
machine learning
geographical distribution
crops
uganda
spellingShingle bananas
fruit crops
geography
machine learning
geographical distribution
crops
uganda
bananas
fruit crops
geography
machine learning
geographical distribution
crops
uganda
Ochola, D.
Boekelo, B.
Ven, G.W. van de
Taulya, G.
Kubiriba, Jerome
Asten, Piet J.A. van
Giller, Ken E.
Mapping spatial distribution and geographic shifts of east African highland banana (Musa spp.) in Uganda
description East African highland banana (Musa acuminata genome group AAA-EA; hereafter referred to as banana) is critical for Uganda’s food supply, hence our aim to map current distribution and to understand changes in banana production areas over the past five decades. We collected banana presence/absence data through an online survey based on high-resolution satellite images and coupled this data with independent covariates as inputs for ensemble machine learning prediction of current banana distribution. We assessed geographic shifts of production areas using spatially explicit differences between the 1958 and 2016 banana distribution maps. The biophysical factors associated with banana spatial distribution and geographic shift were determined using a logistic regression model and classification and regression tree, respectively. Ensemble models were superior (AUC = 0.895; 0.907) compared to their constituent algorithms trained with 12 and 17 covariates, respectively: random forests (AUC = 0.883; 0.901), gradient boosting machines (AUC = 0.878; 0.903), and neural networks (AUC = 0.870; 0.890). The logistic regression model (AUC = 0.879) performance was similar to that for the ensemble model and its constituent algorithms. In 2016, banana cultivation was concentrated in the western (44%) and central (36%) regions, while only a small proportion was in the eastern (18%) and northern (2%) regions. About 60% of increased cultivation since 1958 was in the western region; 50% of decreased cultivation in the eastern region; and 44% of continued cultivation in the central region. Soil organic carbon, soil pH, annual precipitation, slope gradient, bulk density and blue reflectance were associated with increased banana cultivation while precipitation seasonality and mean annual temperature were associated with decreased banana cultivation over the past 50 years. The maps of spatial distribution and geographic shift of banana can support targeting of context-specific intensification options and policy advocacy to avert agriculture driven environmental degradation.
format Journal Article
topic_facet bananas
fruit crops
geography
machine learning
geographical distribution
crops
uganda
author Ochola, D.
Boekelo, B.
Ven, G.W. van de
Taulya, G.
Kubiriba, Jerome
Asten, Piet J.A. van
Giller, Ken E.
author_facet Ochola, D.
Boekelo, B.
Ven, G.W. van de
Taulya, G.
Kubiriba, Jerome
Asten, Piet J.A. van
Giller, Ken E.
author_sort Ochola, D.
title Mapping spatial distribution and geographic shifts of east African highland banana (Musa spp.) in Uganda
title_short Mapping spatial distribution and geographic shifts of east African highland banana (Musa spp.) in Uganda
title_full Mapping spatial distribution and geographic shifts of east African highland banana (Musa spp.) in Uganda
title_fullStr Mapping spatial distribution and geographic shifts of east African highland banana (Musa spp.) in Uganda
title_full_unstemmed Mapping spatial distribution and geographic shifts of east African highland banana (Musa spp.) in Uganda
title_sort mapping spatial distribution and geographic shifts of east african highland banana (musa spp.) in uganda
publisher Public Library of Science
publishDate 2022-02-17
url https://hdl.handle.net/10568/126738
https://doi.org/10.1371/journal.pone.0263439
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