Protein profiling for phylogenetic relationship in snakehead species

Protein banding pattern of eight snakeheads – Channa species viz., Channa striatus, Channa marulius, Channa punctatus, Channa diplogramme, Channa bleheri, Channa gachua, Channa stewartii and Channa aurantimaculata collected from different regions of India were used to study the phylogenetic relationship among them. The banding pattern from muscle protein indicated a unique profile for each species and the electrophoregrams showed similarities among the species studied. In the SDS-PAGE, a maximum of 12 protein bands were obtained for C. gachua followed by 11 for C. diplogramme and 10 for C. marulius whereas less number of bands were recorded for the remaining species. Molecular weight of the protein bands varied from 16 kDa - 232 kDa. UPGMA (Unweighted Pair Group Method with Arithmetic Mean) dendrogram revealed that the phylogenetic relationship was very close among C. aurantimaculata and C. bleheri and also between C. gachua and C. stewarti.

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Detalles Bibliográficos
Autores principales: Haniffa, M.A., Jeya Sheela, P., James Milton, M., Kavitha, K.
Formato: Journal Contribution biblioteca
Idioma:English
Publicado: 2017
Materias:Channa striatus, Channa marulius, Channa punctatus, Channa diplogramme, Channa bleheri, Channa gachua, Channa stewartii, Channa aurantimaculata, Snakehead, Phylogenetic relation, SDS- PAGE, Protein banding, Protein, Species,
Acceso en línea:http://hdl.handle.net/1834/12268
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spelling dig-aquadocs-1834-122682021-05-19T06:42:56Z Protein profiling for phylogenetic relationship in snakehead species Haniffa, M.A. Jeya Sheela, P. James Milton, M. Kavitha, K. Channa striatus Channa marulius Channa punctatus Channa diplogramme Channa bleheri Channa gachua Channa stewartii Channa aurantimaculata Snakehead Phylogenetic relation SDS- PAGE Protein banding Protein Species Protein banding pattern of eight snakeheads – Channa species viz., Channa striatus, Channa marulius, Channa punctatus, Channa diplogramme, Channa bleheri, Channa gachua, Channa stewartii and Channa aurantimaculata collected from different regions of India were used to study the phylogenetic relationship among them. The banding pattern from muscle protein indicated a unique profile for each species and the electrophoregrams showed similarities among the species studied. In the SDS-PAGE, a maximum of 12 protein bands were obtained for C. gachua followed by 11 for C. diplogramme and 10 for C. marulius whereas less number of bands were recorded for the remaining species. Molecular weight of the protein bands varied from 16 kDa - 232 kDa. UPGMA (Unweighted Pair Group Method with Arithmetic Mean) dendrogram revealed that the phylogenetic relationship was very close among C. aurantimaculata and C. bleheri and also between C. gachua and C. stewarti. Published 2018-03-08T13:41:33Z 2018-03-08T13:41:33Z 2017 Journal Contribution Refereed 1562-2916 http://hdl.handle.net/1834/12268 en pp.1178-1186 India
institution UNESCO
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-aquadocs
tag biblioteca
region Europa del Oeste
libraryname Repositorio AQUADOCS
language English
topic Channa striatus
Channa marulius
Channa punctatus
Channa diplogramme
Channa bleheri
Channa gachua
Channa stewartii
Channa aurantimaculata
Snakehead
Phylogenetic relation
SDS- PAGE
Protein banding
Protein
Species
Channa striatus
Channa marulius
Channa punctatus
Channa diplogramme
Channa bleheri
Channa gachua
Channa stewartii
Channa aurantimaculata
Snakehead
Phylogenetic relation
SDS- PAGE
Protein banding
Protein
Species
spellingShingle Channa striatus
Channa marulius
Channa punctatus
Channa diplogramme
Channa bleheri
Channa gachua
Channa stewartii
Channa aurantimaculata
Snakehead
Phylogenetic relation
SDS- PAGE
Protein banding
Protein
Species
Channa striatus
Channa marulius
Channa punctatus
Channa diplogramme
Channa bleheri
Channa gachua
Channa stewartii
Channa aurantimaculata
Snakehead
Phylogenetic relation
SDS- PAGE
Protein banding
Protein
Species
Haniffa, M.A.
Jeya Sheela, P.
James Milton, M.
Kavitha, K.
Protein profiling for phylogenetic relationship in snakehead species
description Protein banding pattern of eight snakeheads – Channa species viz., Channa striatus, Channa marulius, Channa punctatus, Channa diplogramme, Channa bleheri, Channa gachua, Channa stewartii and Channa aurantimaculata collected from different regions of India were used to study the phylogenetic relationship among them. The banding pattern from muscle protein indicated a unique profile for each species and the electrophoregrams showed similarities among the species studied. In the SDS-PAGE, a maximum of 12 protein bands were obtained for C. gachua followed by 11 for C. diplogramme and 10 for C. marulius whereas less number of bands were recorded for the remaining species. Molecular weight of the protein bands varied from 16 kDa - 232 kDa. UPGMA (Unweighted Pair Group Method with Arithmetic Mean) dendrogram revealed that the phylogenetic relationship was very close among C. aurantimaculata and C. bleheri and also between C. gachua and C. stewarti.
format Journal Contribution
topic_facet Channa striatus
Channa marulius
Channa punctatus
Channa diplogramme
Channa bleheri
Channa gachua
Channa stewartii
Channa aurantimaculata
Snakehead
Phylogenetic relation
SDS- PAGE
Protein banding
Protein
Species
author Haniffa, M.A.
Jeya Sheela, P.
James Milton, M.
Kavitha, K.
author_facet Haniffa, M.A.
Jeya Sheela, P.
James Milton, M.
Kavitha, K.
author_sort Haniffa, M.A.
title Protein profiling for phylogenetic relationship in snakehead species
title_short Protein profiling for phylogenetic relationship in snakehead species
title_full Protein profiling for phylogenetic relationship in snakehead species
title_fullStr Protein profiling for phylogenetic relationship in snakehead species
title_full_unstemmed Protein profiling for phylogenetic relationship in snakehead species
title_sort protein profiling for phylogenetic relationship in snakehead species
publishDate 2017
url http://hdl.handle.net/1834/12268
work_keys_str_mv AT haniffama proteinprofilingforphylogeneticrelationshipinsnakeheadspecies
AT jeyasheelap proteinprofilingforphylogeneticrelationshipinsnakeheadspecies
AT jamesmiltonm proteinprofilingforphylogeneticrelationshipinsnakeheadspecies
AT kavithak proteinprofilingforphylogeneticrelationshipinsnakeheadspecies
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