Protein profiling for phylogenetic relationship in snakehead species
Protein banding pattern of eight snakeheads – Channa species viz., Channa striatus, Channa marulius, Channa punctatus, Channa diplogramme, Channa bleheri, Channa gachua, Channa stewartii and Channa aurantimaculata collected from different regions of India were used to study the phylogenetic relationship among them. The banding pattern from muscle protein indicated a unique profile for each species and the electrophoregrams showed similarities among the species studied. In the SDS-PAGE, a maximum of 12 protein bands were obtained for C. gachua followed by 11 for C. diplogramme and 10 for C. marulius whereas less number of bands were recorded for the remaining species. Molecular weight of the protein bands varied from 16 kDa - 232 kDa. UPGMA (Unweighted Pair Group Method with Arithmetic Mean) dendrogram revealed that the phylogenetic relationship was very close among C. aurantimaculata and C. bleheri and also between C. gachua and C. stewarti.
Autores principales: | , , , |
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Formato: | Journal Contribution biblioteca |
Idioma: | English |
Publicado: |
2017
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Materias: | Channa striatus, Channa marulius, Channa punctatus, Channa diplogramme, Channa bleheri, Channa gachua, Channa stewartii, Channa aurantimaculata, Snakehead, Phylogenetic relation, SDS- PAGE, Protein banding, Protein, Species, |
Acceso en línea: | http://hdl.handle.net/1834/12268 |
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dig-aquadocs-1834-122682021-05-19T06:42:56Z Protein profiling for phylogenetic relationship in snakehead species Haniffa, M.A. Jeya Sheela, P. James Milton, M. Kavitha, K. Channa striatus Channa marulius Channa punctatus Channa diplogramme Channa bleheri Channa gachua Channa stewartii Channa aurantimaculata Snakehead Phylogenetic relation SDS- PAGE Protein banding Protein Species Protein banding pattern of eight snakeheads – Channa species viz., Channa striatus, Channa marulius, Channa punctatus, Channa diplogramme, Channa bleheri, Channa gachua, Channa stewartii and Channa aurantimaculata collected from different regions of India were used to study the phylogenetic relationship among them. The banding pattern from muscle protein indicated a unique profile for each species and the electrophoregrams showed similarities among the species studied. In the SDS-PAGE, a maximum of 12 protein bands were obtained for C. gachua followed by 11 for C. diplogramme and 10 for C. marulius whereas less number of bands were recorded for the remaining species. Molecular weight of the protein bands varied from 16 kDa - 232 kDa. UPGMA (Unweighted Pair Group Method with Arithmetic Mean) dendrogram revealed that the phylogenetic relationship was very close among C. aurantimaculata and C. bleheri and also between C. gachua and C. stewarti. Published 2018-03-08T13:41:33Z 2018-03-08T13:41:33Z 2017 Journal Contribution Refereed 1562-2916 http://hdl.handle.net/1834/12268 en pp.1178-1186 India |
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Channa striatus Channa marulius Channa punctatus Channa diplogramme Channa bleheri Channa gachua Channa stewartii Channa aurantimaculata Snakehead Phylogenetic relation SDS- PAGE Protein banding Protein Species Channa striatus Channa marulius Channa punctatus Channa diplogramme Channa bleheri Channa gachua Channa stewartii Channa aurantimaculata Snakehead Phylogenetic relation SDS- PAGE Protein banding Protein Species |
spellingShingle |
Channa striatus Channa marulius Channa punctatus Channa diplogramme Channa bleheri Channa gachua Channa stewartii Channa aurantimaculata Snakehead Phylogenetic relation SDS- PAGE Protein banding Protein Species Channa striatus Channa marulius Channa punctatus Channa diplogramme Channa bleheri Channa gachua Channa stewartii Channa aurantimaculata Snakehead Phylogenetic relation SDS- PAGE Protein banding Protein Species Haniffa, M.A. Jeya Sheela, P. James Milton, M. Kavitha, K. Protein profiling for phylogenetic relationship in snakehead species |
description |
Protein banding pattern of eight snakeheads – Channa species viz., Channa striatus, Channa marulius, Channa punctatus, Channa diplogramme, Channa bleheri, Channa gachua, Channa stewartii and Channa aurantimaculata collected from different regions of India were used to study the phylogenetic relationship among them. The banding pattern from muscle protein indicated a unique profile for each species and the electrophoregrams showed similarities among the species studied. In the SDS-PAGE, a maximum of 12 protein bands were obtained for C. gachua followed by 11 for C. diplogramme and 10 for C. marulius whereas less number of bands were recorded for the remaining species. Molecular weight of the protein bands varied from 16 kDa - 232 kDa. UPGMA (Unweighted Pair Group Method with Arithmetic Mean) dendrogram revealed that the phylogenetic relationship was very close among C. aurantimaculata and C. bleheri and also between C. gachua and C. stewarti. |
format |
Journal Contribution |
topic_facet |
Channa striatus Channa marulius Channa punctatus Channa diplogramme Channa bleheri Channa gachua Channa stewartii Channa aurantimaculata Snakehead Phylogenetic relation SDS- PAGE Protein banding Protein Species |
author |
Haniffa, M.A. Jeya Sheela, P. James Milton, M. Kavitha, K. |
author_facet |
Haniffa, M.A. Jeya Sheela, P. James Milton, M. Kavitha, K. |
author_sort |
Haniffa, M.A. |
title |
Protein profiling for phylogenetic relationship in snakehead species |
title_short |
Protein profiling for phylogenetic relationship in snakehead species |
title_full |
Protein profiling for phylogenetic relationship in snakehead species |
title_fullStr |
Protein profiling for phylogenetic relationship in snakehead species |
title_full_unstemmed |
Protein profiling for phylogenetic relationship in snakehead species |
title_sort |
protein profiling for phylogenetic relationship in snakehead species |
publishDate |
2017 |
url |
http://hdl.handle.net/1834/12268 |
work_keys_str_mv |
AT haniffama proteinprofilingforphylogeneticrelationshipinsnakeheadspecies AT jeyasheelap proteinprofilingforphylogeneticrelationshipinsnakeheadspecies AT jamesmiltonm proteinprofilingforphylogeneticrelationshipinsnakeheadspecies AT kavithak proteinprofilingforphylogeneticrelationshipinsnakeheadspecies |
_version_ |
1756076187512209408 |