Method for obtaining high-resolution proteomic analysis from pericarps of guarana.
Guarana has great agricultural potential and is largely used therapeutically and in the production of non-alcoholic energy drinks. Genomic and proteomic studies are crucial to identify proteins that play central roles in the maintenance and viability of fruits, as well as to identify proteins related to the main metabolic pathways. However, the success of any protein analysis starts with the protein extract preparation, which needs to offer an extract that is free of contaminants. This study aimed to evaluate different extraction methods to obtain high-quantity and high-quality extracts that are compatible with analysis by 2-dimensional electrophoresis and tandem mass spectrometry protein identification. Three different methods were tested: trichloroacetic acid (TCA)/acetone, sodium dodecyl sulfate (SDS)/phenol, and polyvinylpolypyrrolidone (PVPP)/SDS/phenol.
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Format: | Separatas biblioteca |
Language: | English eng |
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2014-10-08
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Subjects: | Plant proteomics, Two-dimensional electrophoresis., Guaraná, Paullinia Cupana., polyphenols., |
Online Access: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/996859 http://dx.doi.org/10.4238/2014.September.29.14 |
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dig-alice-doc-9968592017-08-16T00:22:15Z Method for obtaining high-resolution proteomic analysis from pericarps of guarana. SOUZA, A. L. ANGELO, P. C. da S. NOGUEIRA, P. P. O. GONÇALVES, J. F. C. FRANCO, A. M. ASTOLFI-FILHO, S. LÓPEZ-LOZANO, J. L. ANDRADE, E. V. A. L. Souza, UFAM; PAULA CRISTINA DA SILVA ANGELO, CPAA; P. P. O. Nogueira, FIOCRUZ; J. F. C. Gonçalves, INPA; A. M. Franco, INPA; S. Astolfi-Filho, UFAM; J. L. López-Lozano, Fundação de Medicina Tropical do Amazonas; E. V. Andrade, UFAM. Plant proteomics Two-dimensional electrophoresis. Guaraná Paullinia Cupana. polyphenols. Guarana has great agricultural potential and is largely used therapeutically and in the production of non-alcoholic energy drinks. Genomic and proteomic studies are crucial to identify proteins that play central roles in the maintenance and viability of fruits, as well as to identify proteins related to the main metabolic pathways. However, the success of any protein analysis starts with the protein extract preparation, which needs to offer an extract that is free of contaminants. This study aimed to evaluate different extraction methods to obtain high-quantity and high-quality extracts that are compatible with analysis by 2-dimensional electrophoresis and tandem mass spectrometry protein identification. Three different methods were tested: trichloroacetic acid (TCA)/acetone, sodium dodecyl sulfate (SDS)/phenol, and polyvinylpolypyrrolidone (PVPP)/SDS/phenol. 2014-10-09T08:18:15Z 2014-10-09T08:18:15Z 2014-10-08 2014 2014-10-09T08:18:15Z Separatas Genetics and Molecular Research, v. 13, n. 3, p. 8014-8024, 2014. http://www.alice.cnptia.embrapa.br/alice/handle/doc/996859 http://dx.doi.org/10.4238/2014.September.29.14 en eng openAccess |
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Plant proteomics Two-dimensional electrophoresis. Guaraná Paullinia Cupana. polyphenols. Plant proteomics Two-dimensional electrophoresis. Guaraná Paullinia Cupana. polyphenols. |
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Plant proteomics Two-dimensional electrophoresis. Guaraná Paullinia Cupana. polyphenols. Plant proteomics Two-dimensional electrophoresis. Guaraná Paullinia Cupana. polyphenols. SOUZA, A. L. ANGELO, P. C. da S. NOGUEIRA, P. P. O. GONÇALVES, J. F. C. FRANCO, A. M. ASTOLFI-FILHO, S. LÓPEZ-LOZANO, J. L. ANDRADE, E. V. Method for obtaining high-resolution proteomic analysis from pericarps of guarana. |
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Guarana has great agricultural potential and is largely used therapeutically and in the production of non-alcoholic energy drinks. Genomic and proteomic studies are crucial to identify proteins that play central roles in the maintenance and viability of fruits, as well as to identify proteins related to the main metabolic pathways. However, the success of any protein analysis starts with the protein extract preparation, which needs to offer an extract that is free of contaminants. This study aimed to evaluate different extraction methods to obtain high-quantity and high-quality extracts that are compatible with analysis by 2-dimensional electrophoresis and tandem mass spectrometry protein identification. Three different methods were tested: trichloroacetic acid (TCA)/acetone, sodium dodecyl sulfate (SDS)/phenol, and polyvinylpolypyrrolidone (PVPP)/SDS/phenol. |
author2 |
A. L. Souza, UFAM; PAULA CRISTINA DA SILVA ANGELO, CPAA; P. P. O. Nogueira, FIOCRUZ; J. F. C. Gonçalves, INPA; A. M. Franco, INPA; S. Astolfi-Filho, UFAM; J. L. López-Lozano, Fundação de Medicina Tropical do Amazonas; E. V. Andrade, UFAM. |
author_facet |
A. L. Souza, UFAM; PAULA CRISTINA DA SILVA ANGELO, CPAA; P. P. O. Nogueira, FIOCRUZ; J. F. C. Gonçalves, INPA; A. M. Franco, INPA; S. Astolfi-Filho, UFAM; J. L. López-Lozano, Fundação de Medicina Tropical do Amazonas; E. V. Andrade, UFAM. SOUZA, A. L. ANGELO, P. C. da S. NOGUEIRA, P. P. O. GONÇALVES, J. F. C. FRANCO, A. M. ASTOLFI-FILHO, S. LÓPEZ-LOZANO, J. L. ANDRADE, E. V. |
format |
Separatas |
topic_facet |
Plant proteomics Two-dimensional electrophoresis. Guaraná Paullinia Cupana. polyphenols. |
author |
SOUZA, A. L. ANGELO, P. C. da S. NOGUEIRA, P. P. O. GONÇALVES, J. F. C. FRANCO, A. M. ASTOLFI-FILHO, S. LÓPEZ-LOZANO, J. L. ANDRADE, E. V. |
author_sort |
SOUZA, A. L. |
title |
Method for obtaining high-resolution proteomic analysis from pericarps of guarana. |
title_short |
Method for obtaining high-resolution proteomic analysis from pericarps of guarana. |
title_full |
Method for obtaining high-resolution proteomic analysis from pericarps of guarana. |
title_fullStr |
Method for obtaining high-resolution proteomic analysis from pericarps of guarana. |
title_full_unstemmed |
Method for obtaining high-resolution proteomic analysis from pericarps of guarana. |
title_sort |
method for obtaining high-resolution proteomic analysis from pericarps of guarana. |
publishDate |
2014-10-08 |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/996859 http://dx.doi.org/10.4238/2014.September.29.14 |
work_keys_str_mv |
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