Counting RNAseq reads: which way is better?

Counting RNAseq reads: which way is better?

In this work we show the variation of results we?ve found while working with ~1 billion Illumina reads from drought tolerant Sorghum bicolor genotype in the presence and absence of the stress and compared results found for key genes already characterized.

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Bibliographic Details
Main Authors: SILVA, F. R. da, NODA, R. W., ZERLOTINI, A., LOBO, F. P., CARNEIRO, N. P.
Other Authors: FELIPE RODRIGUES DA SILVA, CNPTIA; ROBERTO WILLIANS NODA, CNPMS; ADHEMAR ZERLOTINI NETO, CNPTIA; FRANCISCO PEREIRA LOBO, CNPTIA; NEWTON PORTILHO CARNEIRO, CNPMS.
Format: Parte de livro biblioteca
Language:English
eng
Published: 2014-03-06
Subjects:Bioinformática, Sequência de RNA, Sorghum., Sorgo, Bioinformatics.,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/981626
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spelling dig-alice-doc-9816262017-08-15T23:20:53Z Counting RNAseq reads: which way is better? SILVA, F. R. da NODA, R. W. ZERLOTINI, A. LOBO, F. P. CARNEIRO, N. P. FELIPE RODRIGUES DA SILVA, CNPTIA; ROBERTO WILLIANS NODA, CNPMS; ADHEMAR ZERLOTINI NETO, CNPTIA; FRANCISCO PEREIRA LOBO, CNPTIA; NEWTON PORTILHO CARNEIRO, CNPMS. Bioinformática Sequência de RNA Sorghum. Sorgo Bioinformatics. In this work we show the variation of results we?ve found while working with ~1 billion Illumina reads from drought tolerant Sorghum bicolor genotype in the presence and absence of the stress and compared results found for key genes already characterized. Pôster N101. 2014-03-06T11:11:11Z 2014-03-06T11:11:11Z 2014-03-06 2013 2014-03-10T11:11:11Z Parte de livro In: ANNUAL INTERNATIONAL CONFERENCE ON INTELLIGENT SYSTEMS FOR MOLECULAR BIOLOGY, 21.; EUROPEAN CONFERENCE ON COMPUTATIONAL BIOLOGY, 12., 2013, Berlin. Posters... Berlin: ISCB, 2013. http://www.alice.cnptia.embrapa.br/alice/handle/doc/981626 en eng openAccess Não paginado.
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language English
eng
topic Bioinformática
Sequência de RNA
Sorghum.
Sorgo
Bioinformatics.
Bioinformática
Sequência de RNA
Sorghum.
Sorgo
Bioinformatics.
spellingShingle Bioinformática
Sequência de RNA
Sorghum.
Sorgo
Bioinformatics.
Bioinformática
Sequência de RNA
Sorghum.
Sorgo
Bioinformatics.
SILVA, F. R. da
NODA, R. W.
ZERLOTINI, A.
LOBO, F. P.
CARNEIRO, N. P.
Counting RNAseq reads: which way is better?
description In this work we show the variation of results we?ve found while working with ~1 billion Illumina reads from drought tolerant Sorghum bicolor genotype in the presence and absence of the stress and compared results found for key genes already characterized.
author2 FELIPE RODRIGUES DA SILVA, CNPTIA; ROBERTO WILLIANS NODA, CNPMS; ADHEMAR ZERLOTINI NETO, CNPTIA; FRANCISCO PEREIRA LOBO, CNPTIA; NEWTON PORTILHO CARNEIRO, CNPMS.
author_facet FELIPE RODRIGUES DA SILVA, CNPTIA; ROBERTO WILLIANS NODA, CNPMS; ADHEMAR ZERLOTINI NETO, CNPTIA; FRANCISCO PEREIRA LOBO, CNPTIA; NEWTON PORTILHO CARNEIRO, CNPMS.
SILVA, F. R. da
NODA, R. W.
ZERLOTINI, A.
LOBO, F. P.
CARNEIRO, N. P.
format Parte de livro
topic_facet Bioinformática
Sequência de RNA
Sorghum.
Sorgo
Bioinformatics.
author SILVA, F. R. da
NODA, R. W.
ZERLOTINI, A.
LOBO, F. P.
CARNEIRO, N. P.
author_sort SILVA, F. R. da
title Counting RNAseq reads: which way is better?
title_short Counting RNAseq reads: which way is better?
title_full Counting RNAseq reads: which way is better?
title_fullStr Counting RNAseq reads: which way is better?
title_full_unstemmed Counting RNAseq reads: which way is better?
title_sort counting rnaseq reads: which way is better?
publishDate 2014-03-06
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/981626
work_keys_str_mv AT silvafrda countingrnaseqreadswhichwayisbetter
AT nodarw countingrnaseqreadswhichwayisbetter
AT zerlotinia countingrnaseqreadswhichwayisbetter
AT lobofp countingrnaseqreadswhichwayisbetter
AT carneironp countingrnaseqreadswhichwayisbetter
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