Using Galaxy to facilitate RNA-Seq analysis.

Using Galaxy to facilitate RNA-Seq analysis.

In this experiment, two RNA-Seq datasets were analyzed in order to evaluate both, the Galaxy platform and the RNA-Seq analysis suite. We were able to observe that such combination of softwares is really effective on allowing two biologists researchers to perform the whole transcriptome analysis thro...

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Main Authors: NAGAI, L. A. E., SILVA, F. R., CINTRA, L. C., GIACHETTO, P. F., ZERLOTINI NETO, A.
Other Authors: LUÍS AUGUSTO EIJY NAGAI, Estagiário do CNPTIA; FELIPE RODRIGUES DA SILVA, CNPTIA; LEANDRO CARRIJO CINTRA, CNPTIA; POLIANA FERNANDA GIACHETTO, CNPTIA; ADHEMAR ZERLOTINI NETO, CNPTIA.
Format: Anais e Proceedings de eventos biblioteca
Language:English
eng
Published: 2013-01-28
Subjects:Bioinformática, Sequenciamento de RNA, Plataforma Galaxy, Sequence analysis, Bioinformatics, Computer software,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/946554
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spelling dig-alice-doc-9465542017-08-16T00:07:37Z Using Galaxy to facilitate RNA-Seq analysis. NAGAI, L. A. E. SILVA, F. R. CINTRA, L. C. GIACHETTO, P. F. ZERLOTINI NETO, A. LUÍS AUGUSTO EIJY NAGAI, Estagiário do CNPTIA; FELIPE RODRIGUES DA SILVA, CNPTIA; LEANDRO CARRIJO CINTRA, CNPTIA; POLIANA FERNANDA GIACHETTO, CNPTIA; ADHEMAR ZERLOTINI NETO, CNPTIA. Bioinformática Sequenciamento de RNA Plataforma Galaxy Sequence analysis Bioinformatics Computer software In this experiment, two RNA-Seq datasets were analyzed in order to evaluate both, the Galaxy platform and the RNA-Seq analysis suite. We were able to observe that such combination of softwares is really effective on allowing two biologists researchers to perform the whole transcriptome analysis through a intuitive web interface. X-MEETING 2012. 2013-01-28T11:11:11Z 2013-01-28T11:11:11Z 2013-01-28 2012 2020-01-23T11:11:11Z Anais e Proceedings de eventos In: INTERNATIONAL CONFERENCE OF THE BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 8., 2012, Campinas. Abstract book... Ribeirão Preto: AB3C, 2012. http://www.alice.cnptia.embrapa.br/alice/handle/doc/946554 en eng openAccess Não paginado.
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language English
eng
topic Bioinformática
Sequenciamento de RNA
Plataforma Galaxy
Sequence analysis
Bioinformatics
Computer software
Bioinformática
Sequenciamento de RNA
Plataforma Galaxy
Sequence analysis
Bioinformatics
Computer software
spellingShingle Bioinformática
Sequenciamento de RNA
Plataforma Galaxy
Sequence analysis
Bioinformatics
Computer software
Bioinformática
Sequenciamento de RNA
Plataforma Galaxy
Sequence analysis
Bioinformatics
Computer software
NAGAI, L. A. E.
SILVA, F. R.
CINTRA, L. C.
GIACHETTO, P. F.
ZERLOTINI NETO, A.
Using Galaxy to facilitate RNA-Seq analysis.
description In this experiment, two RNA-Seq datasets were analyzed in order to evaluate both, the Galaxy platform and the RNA-Seq analysis suite. We were able to observe that such combination of softwares is really effective on allowing two biologists researchers to perform the whole transcriptome analysis through a intuitive web interface.
author2 LUÍS AUGUSTO EIJY NAGAI, Estagiário do CNPTIA; FELIPE RODRIGUES DA SILVA, CNPTIA; LEANDRO CARRIJO CINTRA, CNPTIA; POLIANA FERNANDA GIACHETTO, CNPTIA; ADHEMAR ZERLOTINI NETO, CNPTIA.
author_facet LUÍS AUGUSTO EIJY NAGAI, Estagiário do CNPTIA; FELIPE RODRIGUES DA SILVA, CNPTIA; LEANDRO CARRIJO CINTRA, CNPTIA; POLIANA FERNANDA GIACHETTO, CNPTIA; ADHEMAR ZERLOTINI NETO, CNPTIA.
NAGAI, L. A. E.
SILVA, F. R.
CINTRA, L. C.
GIACHETTO, P. F.
ZERLOTINI NETO, A.
format Anais e Proceedings de eventos
topic_facet Bioinformática
Sequenciamento de RNA
Plataforma Galaxy
Sequence analysis
Bioinformatics
Computer software
author NAGAI, L. A. E.
SILVA, F. R.
CINTRA, L. C.
GIACHETTO, P. F.
ZERLOTINI NETO, A.
author_sort NAGAI, L. A. E.
title Using Galaxy to facilitate RNA-Seq analysis.
title_short Using Galaxy to facilitate RNA-Seq analysis.
title_full Using Galaxy to facilitate RNA-Seq analysis.
title_fullStr Using Galaxy to facilitate RNA-Seq analysis.
title_full_unstemmed Using Galaxy to facilitate RNA-Seq analysis.
title_sort using galaxy to facilitate rna-seq analysis.
publishDate 2013-01-28
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/946554
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