Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.

The objective of this work was to estimate the genetic diversity of improved banana diploids using data from quantitative analysis and from simple sequence repeats (SSR) marker, simultaneously. The experiment was carried out with 33 diploids, in an augmented block design with 30 regular treatments and three common ones. Eighteen agronomic characteristics and 20 SSR primers were used. The agronomic characteristics and the SSR were analyzed simultaneously by the Ward-MLM, cluster, and IML procedures. The Ward clustering method considered the combined matrix obtained by the Gower algorithm. The Ward-MLM procedure identified three ideal groups (G1, G2, and G3) based on pseudo-F and pseudo-t2 statistics. The dendrogram showed relative similarity between the G1 genotypes, justified by genealogy. In G2, 'Calcutta 4' appears in 62% of the genealogies. Similar behavior was observed in G3, in which the 028003-01 diploid is the male parent of the 086079-10 and 042079-06 genotypes. The method with canonical variables had greater discriminatory power than Ward-MLM. Although reduced, the genetic variability available is sufficient to be used in the development of new hybrids.

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Main Authors: PEREIRA, V. M., BORGES, C. V., BRANDÃO, L. P., OLIVEIRA, L. S., SOUZA, C. P. F., GONÇALVES, Z. S., SILVA, S. de O. e, SEREJO, J. A. dos S., FERREIRA, C. F., AMORIM, E. P., LEDO, C. A. da S.
Other Authors: VALQUÍRIA MARTINS PEREIRA, UFLA; CRISTINE VANZ BORGES, UFRB; LÍVIA PINTO BRANDÃO, UFRB; LARISSA SANTOS OLIVEIRA, UFLA; CINTIA PAULA FEITOSA SOUZA, UFRB; ZALMAR SANTANA GONÇALVES, UFRB; SEBASTIÃO DE OLIVEIRA E SILVA, UFRB; JANAY ALMEIDA DOS SANTOS SEREJO, CNPMF; CLAUDIA FORTES FERREIRA, CNPMF; EDSON PERITO AMORIM, CNPMF; CARLOS ALBERTO DA SILVA LEDO, CNPMF.
Format: Artigo de periódico biblioteca
Language:English
eng
Published: 2013-01-09
Subjects:Genetic diversity,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/944568
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spelling dig-alice-doc-9445682017-08-16T01:57:28Z Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method. PEREIRA, V. M. BORGES, C. V. BRANDÃO, L. P. OLIVEIRA, L. S. SOUZA, C. P. F. GONÇALVES, Z. S. SILVA, S. de O. e SEREJO, J. A. dos S. FERREIRA, C. F. AMORIM, E. P. LEDO, C. A. da S. VALQUÍRIA MARTINS PEREIRA, UFLA; CRISTINE VANZ BORGES, UFRB; LÍVIA PINTO BRANDÃO, UFRB; LARISSA SANTOS OLIVEIRA, UFLA; CINTIA PAULA FEITOSA SOUZA, UFRB; ZALMAR SANTANA GONÇALVES, UFRB; SEBASTIÃO DE OLIVEIRA E SILVA, UFRB; JANAY ALMEIDA DOS SANTOS SEREJO, CNPMF; CLAUDIA FORTES FERREIRA, CNPMF; EDSON PERITO AMORIM, CNPMF; CARLOS ALBERTO DA SILVA LEDO, CNPMF. Genetic diversity The objective of this work was to estimate the genetic diversity of improved banana diploids using data from quantitative analysis and from simple sequence repeats (SSR) marker, simultaneously. The experiment was carried out with 33 diploids, in an augmented block design with 30 regular treatments and three common ones. Eighteen agronomic characteristics and 20 SSR primers were used. The agronomic characteristics and the SSR were analyzed simultaneously by the Ward-MLM, cluster, and IML procedures. The Ward clustering method considered the combined matrix obtained by the Gower algorithm. The Ward-MLM procedure identified three ideal groups (G1, G2, and G3) based on pseudo-F and pseudo-t2 statistics. The dendrogram showed relative similarity between the G1 genotypes, justified by genealogy. In G2, 'Calcutta 4' appears in 62% of the genealogies. Similar behavior was observed in G3, in which the 028003-01 diploid is the male parent of the 086079-10 and 042079-06 genotypes. The method with canonical variables had greater discriminatory power than Ward-MLM. Although reduced, the genetic variability available is sufficient to be used in the development of new hybrids. 2013-01-09T11:11:11Z 2013-01-09T11:11:11Z 2013-01-09 2012 2013-02-01T11:11:11Z Artigo de periódico Pesquisa Agropecuária Brasileira, Brasília, v. 47, n. 10, p. 1480-1488, out. 2012. 0100-204X http://www.alice.cnptia.embrapa.br/alice/handle/doc/944568 en eng openAccess
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language English
eng
topic Genetic diversity
Genetic diversity
spellingShingle Genetic diversity
Genetic diversity
PEREIRA, V. M.
BORGES, C. V.
BRANDÃO, L. P.
OLIVEIRA, L. S.
SOUZA, C. P. F.
GONÇALVES, Z. S.
SILVA, S. de O. e
SEREJO, J. A. dos S.
FERREIRA, C. F.
AMORIM, E. P.
LEDO, C. A. da S.
Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.
description The objective of this work was to estimate the genetic diversity of improved banana diploids using data from quantitative analysis and from simple sequence repeats (SSR) marker, simultaneously. The experiment was carried out with 33 diploids, in an augmented block design with 30 regular treatments and three common ones. Eighteen agronomic characteristics and 20 SSR primers were used. The agronomic characteristics and the SSR were analyzed simultaneously by the Ward-MLM, cluster, and IML procedures. The Ward clustering method considered the combined matrix obtained by the Gower algorithm. The Ward-MLM procedure identified three ideal groups (G1, G2, and G3) based on pseudo-F and pseudo-t2 statistics. The dendrogram showed relative similarity between the G1 genotypes, justified by genealogy. In G2, 'Calcutta 4' appears in 62% of the genealogies. Similar behavior was observed in G3, in which the 028003-01 diploid is the male parent of the 086079-10 and 042079-06 genotypes. The method with canonical variables had greater discriminatory power than Ward-MLM. Although reduced, the genetic variability available is sufficient to be used in the development of new hybrids.
author2 VALQUÍRIA MARTINS PEREIRA, UFLA; CRISTINE VANZ BORGES, UFRB; LÍVIA PINTO BRANDÃO, UFRB; LARISSA SANTOS OLIVEIRA, UFLA; CINTIA PAULA FEITOSA SOUZA, UFRB; ZALMAR SANTANA GONÇALVES, UFRB; SEBASTIÃO DE OLIVEIRA E SILVA, UFRB; JANAY ALMEIDA DOS SANTOS SEREJO, CNPMF; CLAUDIA FORTES FERREIRA, CNPMF; EDSON PERITO AMORIM, CNPMF; CARLOS ALBERTO DA SILVA LEDO, CNPMF.
author_facet VALQUÍRIA MARTINS PEREIRA, UFLA; CRISTINE VANZ BORGES, UFRB; LÍVIA PINTO BRANDÃO, UFRB; LARISSA SANTOS OLIVEIRA, UFLA; CINTIA PAULA FEITOSA SOUZA, UFRB; ZALMAR SANTANA GONÇALVES, UFRB; SEBASTIÃO DE OLIVEIRA E SILVA, UFRB; JANAY ALMEIDA DOS SANTOS SEREJO, CNPMF; CLAUDIA FORTES FERREIRA, CNPMF; EDSON PERITO AMORIM, CNPMF; CARLOS ALBERTO DA SILVA LEDO, CNPMF.
PEREIRA, V. M.
BORGES, C. V.
BRANDÃO, L. P.
OLIVEIRA, L. S.
SOUZA, C. P. F.
GONÇALVES, Z. S.
SILVA, S. de O. e
SEREJO, J. A. dos S.
FERREIRA, C. F.
AMORIM, E. P.
LEDO, C. A. da S.
format Artigo de periódico
topic_facet Genetic diversity
author PEREIRA, V. M.
BORGES, C. V.
BRANDÃO, L. P.
OLIVEIRA, L. S.
SOUZA, C. P. F.
GONÇALVES, Z. S.
SILVA, S. de O. e
SEREJO, J. A. dos S.
FERREIRA, C. F.
AMORIM, E. P.
LEDO, C. A. da S.
author_sort PEREIRA, V. M.
title Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.
title_short Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.
title_full Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.
title_fullStr Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.
title_full_unstemmed Genetic diversity between improved banana diploids using canonical variables and the Ward-MLM method.
title_sort genetic diversity between improved banana diploids using canonical variables and the ward-mlm method.
publishDate 2013-01-09
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/944568
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