Genomic selection in tropical forage grasses: current status and future applications.

The world population is expected to be larger and wealthier over the next few decades and will require more animal products, such as milk and beef. Tropical regions have great potential to meet this growing global demand, where pasturelands play a major role in supporting increased animal production. Better forage is required in consonance with improved sustainability as the planted area should not increase and larger areas cultivated with one or a few forage species should be avoided. Although, conventional tropical forage breeding has successfully released well-adapted and high-yielding cultivars over the last few decades, genetic gains from these programs have been low in view of the growing food demand worldwide. To guarantee their future impact on livestock production, breeding programs should leverage genotyping, phenotyping, and envirotyping strategies to increase genetic gains. Genomic selection (GS) and genomewide association studies play a primary role in this process, with the advantage of increasing genetic gain due to greater selection accuracy, reduced cycle time, and increased number of individuals that can be evaluated. This strategy provides solutions to bottlenecks faced by conventional breeding methods, including long breeding cycles and difficulties to evaluate complex traits. Initial results from implementing GS in tropical forage grasses (TFGs) are promising with notable improvements over phenotypic selection alone. However, the practical impact of GS in TFG breeding programs remains unclear. The development of appropriately sized training populations is essential for the evaluation and validation of selection markers based on estimated breeding values. Large panels of single-nucleotide polymorphism markers in different tropical forage species are required for multiple application targets at a reduced cost. In this context, this review highlights the current challenges, achievements, availability, and development of genomic resources and statistical methods for the implementation of GS in TFGs. Additionally, the prediction accuracies from recent experiments and the potential to harness diversity from genebanks are discussed. Although, GS in TFGs is still incipient, the advances in genomic tools and statistical models will speed up its implementation in the foreseeable future. All TFG breeding programs should be prepared for these changes.

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Main Authors: SIMEÃO, R. M., RESENDE, M. D. V. de, ALVES, R. S., PESSOA FILHO, M. A. C. de P., AZEVEDO, A. L. S., JONES, C. S., PEREIRA, J. F., MACHADO, J. C.
Other Authors: ROSANGELA MARIA SIMEAO, CNPGC
Format: Artigo de periódico biblioteca
Language:Ingles
English
Published: 2021-08-09
Subjects:Seleção assistida, Seleção genômica, Brachiaria, Apomixia, Poliploidia, Gramínea, Apomixis, Marker-assisted selection, Polyploidy,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/1133333
https://doi.org/10.3389/fpls.2021.665195
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spelling dig-alice-doc-11333332021-08-10T02:07:05Z Genomic selection in tropical forage grasses: current status and future applications. SIMEÃO, R. M. RESENDE, M. D. V. de ALVES, R. S. PESSOA FILHO, M. A. C. de P. AZEVEDO, A. L. S. JONES, C. S. PEREIRA, J. F. MACHADO, J. C. ROSANGELA MARIA SIMEAO, CNPGC MARCOS DEON VILELA DE RESENDE, CNPCa JORGE FERNANDO PEREIRA, CNPGL CHRIS S. JONES, International Livestock Research Institute, Nairobi, Kenya ANA LUISA SOUSA AZEVEDO, CNPGL MARCO AURELIO CALDAS DE PINHO PESSO, CPAC RODRIGO S. ALVES, Instituto Nacional de Ciência e Tecnologia do Café, Universidade Federal de Viçosa, Viçosa, Brasil JUAREZ CAMPOLINA MACHADO, CNPGL. Seleção assistida Seleção genômica Brachiaria Apomixia Poliploidia Gramínea Apomixis Marker-assisted selection Polyploidy The world population is expected to be larger and wealthier over the next few decades and will require more animal products, such as milk and beef. Tropical regions have great potential to meet this growing global demand, where pasturelands play a major role in supporting increased animal production. Better forage is required in consonance with improved sustainability as the planted area should not increase and larger areas cultivated with one or a few forage species should be avoided. Although, conventional tropical forage breeding has successfully released well-adapted and high-yielding cultivars over the last few decades, genetic gains from these programs have been low in view of the growing food demand worldwide. To guarantee their future impact on livestock production, breeding programs should leverage genotyping, phenotyping, and envirotyping strategies to increase genetic gains. Genomic selection (GS) and genomewide association studies play a primary role in this process, with the advantage of increasing genetic gain due to greater selection accuracy, reduced cycle time, and increased number of individuals that can be evaluated. This strategy provides solutions to bottlenecks faced by conventional breeding methods, including long breeding cycles and difficulties to evaluate complex traits. Initial results from implementing GS in tropical forage grasses (TFGs) are promising with notable improvements over phenotypic selection alone. However, the practical impact of GS in TFG breeding programs remains unclear. The development of appropriately sized training populations is essential for the evaluation and validation of selection markers based on estimated breeding values. Large panels of single-nucleotide polymorphism markers in different tropical forage species are required for multiple application targets at a reduced cost. In this context, this review highlights the current challenges, achievements, availability, and development of genomic resources and statistical methods for the implementation of GS in TFGs. Additionally, the prediction accuracies from recent experiments and the potential to harness diversity from genebanks are discussed. Although, GS in TFGs is still incipient, the advances in genomic tools and statistical models will speed up its implementation in the foreseeable future. All TFG breeding programs should be prepared for these changes. 2021-08-10T02:06:56Z 2021-08-10T02:06:56Z 2021-08-09 2021 Artigo de periódico Frontiers in Plant Science, v. 12, article 665195, 2021. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1133333 https://doi.org/10.3389/fpls.2021.665195 Ingles en openAccess
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language Ingles
English
topic Seleção assistida
Seleção genômica
Brachiaria
Apomixia
Poliploidia
Gramínea
Apomixis
Marker-assisted selection
Polyploidy
Seleção assistida
Seleção genômica
Brachiaria
Apomixia
Poliploidia
Gramínea
Apomixis
Marker-assisted selection
Polyploidy
spellingShingle Seleção assistida
Seleção genômica
Brachiaria
Apomixia
Poliploidia
Gramínea
Apomixis
Marker-assisted selection
Polyploidy
Seleção assistida
Seleção genômica
Brachiaria
Apomixia
Poliploidia
Gramínea
Apomixis
Marker-assisted selection
Polyploidy
SIMEÃO, R. M.
RESENDE, M. D. V. de
ALVES, R. S.
PESSOA FILHO, M. A. C. de P.
AZEVEDO, A. L. S.
JONES, C. S.
PEREIRA, J. F.
MACHADO, J. C.
Genomic selection in tropical forage grasses: current status and future applications.
description The world population is expected to be larger and wealthier over the next few decades and will require more animal products, such as milk and beef. Tropical regions have great potential to meet this growing global demand, where pasturelands play a major role in supporting increased animal production. Better forage is required in consonance with improved sustainability as the planted area should not increase and larger areas cultivated with one or a few forage species should be avoided. Although, conventional tropical forage breeding has successfully released well-adapted and high-yielding cultivars over the last few decades, genetic gains from these programs have been low in view of the growing food demand worldwide. To guarantee their future impact on livestock production, breeding programs should leverage genotyping, phenotyping, and envirotyping strategies to increase genetic gains. Genomic selection (GS) and genomewide association studies play a primary role in this process, with the advantage of increasing genetic gain due to greater selection accuracy, reduced cycle time, and increased number of individuals that can be evaluated. This strategy provides solutions to bottlenecks faced by conventional breeding methods, including long breeding cycles and difficulties to evaluate complex traits. Initial results from implementing GS in tropical forage grasses (TFGs) are promising with notable improvements over phenotypic selection alone. However, the practical impact of GS in TFG breeding programs remains unclear. The development of appropriately sized training populations is essential for the evaluation and validation of selection markers based on estimated breeding values. Large panels of single-nucleotide polymorphism markers in different tropical forage species are required for multiple application targets at a reduced cost. In this context, this review highlights the current challenges, achievements, availability, and development of genomic resources and statistical methods for the implementation of GS in TFGs. Additionally, the prediction accuracies from recent experiments and the potential to harness diversity from genebanks are discussed. Although, GS in TFGs is still incipient, the advances in genomic tools and statistical models will speed up its implementation in the foreseeable future. All TFG breeding programs should be prepared for these changes.
author2 ROSANGELA MARIA SIMEAO, CNPGC
author_facet ROSANGELA MARIA SIMEAO, CNPGC
SIMEÃO, R. M.
RESENDE, M. D. V. de
ALVES, R. S.
PESSOA FILHO, M. A. C. de P.
AZEVEDO, A. L. S.
JONES, C. S.
PEREIRA, J. F.
MACHADO, J. C.
format Artigo de periódico
topic_facet Seleção assistida
Seleção genômica
Brachiaria
Apomixia
Poliploidia
Gramínea
Apomixis
Marker-assisted selection
Polyploidy
author SIMEÃO, R. M.
RESENDE, M. D. V. de
ALVES, R. S.
PESSOA FILHO, M. A. C. de P.
AZEVEDO, A. L. S.
JONES, C. S.
PEREIRA, J. F.
MACHADO, J. C.
author_sort SIMEÃO, R. M.
title Genomic selection in tropical forage grasses: current status and future applications.
title_short Genomic selection in tropical forage grasses: current status and future applications.
title_full Genomic selection in tropical forage grasses: current status and future applications.
title_fullStr Genomic selection in tropical forage grasses: current status and future applications.
title_full_unstemmed Genomic selection in tropical forage grasses: current status and future applications.
title_sort genomic selection in tropical forage grasses: current status and future applications.
publishDate 2021-08-09
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1133333
https://doi.org/10.3389/fpls.2021.665195
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