InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams.
Abstract. Background: Set comparisons permeate a large number of data analysis workflows, in particular workflows in biological sciences. Venn diagrams are frequently employed for such analysis but current tools are limited. Results: We have developed InteractiVenn, a more flexible tool for interacting with Venn diagrams including up to six sets. It offers a clean interface for Venn diagram construction and enables analysis of set unions while preserving the shape of the diagram. Set unions are useful to reveal differences and similarities among sets and may be guided in our tool by a tree or by a list of set unions. The tool also allows obtaining subsets? elements, saving and loading sets for further analyses, and exporting the diagram in vector and image formats. InteractiVenn has been used to analyze two biological datasets, but it may serve set analysis in a broad range of domains. Conclusions: InteractiVenn allows set unions in Venn diagrams to be explored thoroughly, by consequence extending the ability to analyze combinations of sets with additional observations, yielded by novel interactions between joined sets. InteractiVenn is freely available online at: www.interactivenn.net.
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Format: | Artigo de periódico biblioteca |
Language: | English eng |
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2019-02-07
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Subjects: | Diagrama de Venn, Diagrama de Edwards-Venn, Venn diagram, Edwards-Venn diagram, Interaction, Set-unions, |
Online Access: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1105705 |
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dig-alice-doc-11057052019-02-07T23:38:21Z InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams. HEBERLE, H. MEIRELLES, G. V. SILVA, F. R. da TELLES, G. P. MINGHIM, R. HENRY HEBERLE, ICMC/USP; GABRIELA VAZ MEIRELLES, Laboratório Nacional de Biociências, Campinas; FELIPE RODRIGUES DA SILVA, CNPTIA; GUILHERME P. TELLES, IC/Unicamp; ROSANE MINGHIM, ICMC/USP. Diagrama de Venn Diagrama de Edwards-Venn Venn diagram Edwards-Venn diagram Interaction Set-unions Abstract. Background: Set comparisons permeate a large number of data analysis workflows, in particular workflows in biological sciences. Venn diagrams are frequently employed for such analysis but current tools are limited. Results: We have developed InteractiVenn, a more flexible tool for interacting with Venn diagrams including up to six sets. It offers a clean interface for Venn diagram construction and enables analysis of set unions while preserving the shape of the diagram. Set unions are useful to reveal differences and similarities among sets and may be guided in our tool by a tree or by a list of set unions. The tool also allows obtaining subsets? elements, saving and loading sets for further analyses, and exporting the diagram in vector and image formats. InteractiVenn has been used to analyze two biological datasets, but it may serve set analysis in a broad range of domains. Conclusions: InteractiVenn allows set unions in Venn diagrams to be explored thoroughly, by consequence extending the ability to analyze combinations of sets with additional observations, yielded by novel interactions between joined sets. InteractiVenn is freely available online at: www.interactivenn.net. Article number: 169. 2019-02-07T23:38:14Z 2019-02-07T23:38:14Z 2019-02-07 2015 2019-12-19T11:11:11Z Artigo de periódico BMC Bioinformatics, v. 16, p. 1-7, 2015. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1105705 10.1186/s12859-015-0611-3 en eng openAccess |
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Diagrama de Venn Diagrama de Edwards-Venn Venn diagram Edwards-Venn diagram Interaction Set-unions Diagrama de Venn Diagrama de Edwards-Venn Venn diagram Edwards-Venn diagram Interaction Set-unions |
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Diagrama de Venn Diagrama de Edwards-Venn Venn diagram Edwards-Venn diagram Interaction Set-unions Diagrama de Venn Diagrama de Edwards-Venn Venn diagram Edwards-Venn diagram Interaction Set-unions HEBERLE, H. MEIRELLES, G. V. SILVA, F. R. da TELLES, G. P. MINGHIM, R. InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams. |
description |
Abstract. Background: Set comparisons permeate a large number of data analysis workflows, in particular workflows in biological sciences. Venn diagrams are frequently employed for such analysis but current tools are limited. Results: We have developed InteractiVenn, a more flexible tool for interacting with Venn diagrams including up to six sets. It offers a clean interface for Venn diagram construction and enables analysis of set unions while preserving the shape of the diagram. Set unions are useful to reveal differences and similarities among sets and may be guided in our tool by a tree or by a list of set unions. The tool also allows obtaining subsets? elements, saving and loading sets for further analyses, and exporting the diagram in vector and image formats. InteractiVenn has been used to analyze two biological datasets, but it may serve set analysis in a broad range of domains. Conclusions: InteractiVenn allows set unions in Venn diagrams to be explored thoroughly, by consequence extending the ability to analyze combinations of sets with additional observations, yielded by novel interactions between joined sets. InteractiVenn is freely available online at: www.interactivenn.net. |
author2 |
HENRY HEBERLE, ICMC/USP; GABRIELA VAZ MEIRELLES, Laboratório Nacional de Biociências, Campinas; FELIPE RODRIGUES DA SILVA, CNPTIA; GUILHERME P. TELLES, IC/Unicamp; ROSANE MINGHIM, ICMC/USP. |
author_facet |
HENRY HEBERLE, ICMC/USP; GABRIELA VAZ MEIRELLES, Laboratório Nacional de Biociências, Campinas; FELIPE RODRIGUES DA SILVA, CNPTIA; GUILHERME P. TELLES, IC/Unicamp; ROSANE MINGHIM, ICMC/USP. HEBERLE, H. MEIRELLES, G. V. SILVA, F. R. da TELLES, G. P. MINGHIM, R. |
format |
Artigo de periódico |
topic_facet |
Diagrama de Venn Diagrama de Edwards-Venn Venn diagram Edwards-Venn diagram Interaction Set-unions |
author |
HEBERLE, H. MEIRELLES, G. V. SILVA, F. R. da TELLES, G. P. MINGHIM, R. |
author_sort |
HEBERLE, H. |
title |
InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams. |
title_short |
InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams. |
title_full |
InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams. |
title_fullStr |
InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams. |
title_full_unstemmed |
InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams. |
title_sort |
interactivenn: a web-based tool for theanalysis of sets through venn diagrams. |
publishDate |
2019-02-07 |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1105705 |
work_keys_str_mv |
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1756025674372481024 |