InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams.

Abstract. Background: Set comparisons permeate a large number of data analysis workflows, in particular workflows in biological sciences. Venn diagrams are frequently employed for such analysis but current tools are limited. Results: We have developed InteractiVenn, a more flexible tool for interacting with Venn diagrams including up to six sets. It offers a clean interface for Venn diagram construction and enables analysis of set unions while preserving the shape of the diagram. Set unions are useful to reveal differences and similarities among sets and may be guided in our tool by a tree or by a list of set unions. The tool also allows obtaining subsets? elements, saving and loading sets for further analyses, and exporting the diagram in vector and image formats. InteractiVenn has been used to analyze two biological datasets, but it may serve set analysis in a broad range of domains. Conclusions: InteractiVenn allows set unions in Venn diagrams to be explored thoroughly, by consequence extending the ability to analyze combinations of sets with additional observations, yielded by novel interactions between joined sets. InteractiVenn is freely available online at: www.interactivenn.net.

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Bibliographic Details
Main Authors: HEBERLE, H., MEIRELLES, G. V., SILVA, F. R. da, TELLES, G. P., MINGHIM, R.
Other Authors: HENRY HEBERLE, ICMC/USP; GABRIELA VAZ MEIRELLES, Laboratório Nacional de Biociências, Campinas; FELIPE RODRIGUES DA SILVA, CNPTIA; GUILHERME P. TELLES, IC/Unicamp; ROSANE MINGHIM, ICMC/USP.
Format: Artigo de periódico biblioteca
Language:English
eng
Published: 2019-02-07
Subjects:Diagrama de Venn, Diagrama de Edwards-Venn, Venn diagram, Edwards-Venn diagram, Interaction, Set-unions,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/1105705
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spelling dig-alice-doc-11057052019-02-07T23:38:21Z InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams. HEBERLE, H. MEIRELLES, G. V. SILVA, F. R. da TELLES, G. P. MINGHIM, R. HENRY HEBERLE, ICMC/USP; GABRIELA VAZ MEIRELLES, Laboratório Nacional de Biociências, Campinas; FELIPE RODRIGUES DA SILVA, CNPTIA; GUILHERME P. TELLES, IC/Unicamp; ROSANE MINGHIM, ICMC/USP. Diagrama de Venn Diagrama de Edwards-Venn Venn diagram Edwards-Venn diagram Interaction Set-unions Abstract. Background: Set comparisons permeate a large number of data analysis workflows, in particular workflows in biological sciences. Venn diagrams are frequently employed for such analysis but current tools are limited. Results: We have developed InteractiVenn, a more flexible tool for interacting with Venn diagrams including up to six sets. It offers a clean interface for Venn diagram construction and enables analysis of set unions while preserving the shape of the diagram. Set unions are useful to reveal differences and similarities among sets and may be guided in our tool by a tree or by a list of set unions. The tool also allows obtaining subsets? elements, saving and loading sets for further analyses, and exporting the diagram in vector and image formats. InteractiVenn has been used to analyze two biological datasets, but it may serve set analysis in a broad range of domains. Conclusions: InteractiVenn allows set unions in Venn diagrams to be explored thoroughly, by consequence extending the ability to analyze combinations of sets with additional observations, yielded by novel interactions between joined sets. InteractiVenn is freely available online at: www.interactivenn.net. Article number: 169. 2019-02-07T23:38:14Z 2019-02-07T23:38:14Z 2019-02-07 2015 2019-12-19T11:11:11Z Artigo de periódico BMC Bioinformatics, v. 16, p. 1-7, 2015. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1105705 10.1186/s12859-015-0611-3 en eng openAccess
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language English
eng
topic Diagrama de Venn
Diagrama de Edwards-Venn
Venn diagram
Edwards-Venn diagram
Interaction
Set-unions
Diagrama de Venn
Diagrama de Edwards-Venn
Venn diagram
Edwards-Venn diagram
Interaction
Set-unions
spellingShingle Diagrama de Venn
Diagrama de Edwards-Venn
Venn diagram
Edwards-Venn diagram
Interaction
Set-unions
Diagrama de Venn
Diagrama de Edwards-Venn
Venn diagram
Edwards-Venn diagram
Interaction
Set-unions
HEBERLE, H.
MEIRELLES, G. V.
SILVA, F. R. da
TELLES, G. P.
MINGHIM, R.
InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams.
description Abstract. Background: Set comparisons permeate a large number of data analysis workflows, in particular workflows in biological sciences. Venn diagrams are frequently employed for such analysis but current tools are limited. Results: We have developed InteractiVenn, a more flexible tool for interacting with Venn diagrams including up to six sets. It offers a clean interface for Venn diagram construction and enables analysis of set unions while preserving the shape of the diagram. Set unions are useful to reveal differences and similarities among sets and may be guided in our tool by a tree or by a list of set unions. The tool also allows obtaining subsets? elements, saving and loading sets for further analyses, and exporting the diagram in vector and image formats. InteractiVenn has been used to analyze two biological datasets, but it may serve set analysis in a broad range of domains. Conclusions: InteractiVenn allows set unions in Venn diagrams to be explored thoroughly, by consequence extending the ability to analyze combinations of sets with additional observations, yielded by novel interactions between joined sets. InteractiVenn is freely available online at: www.interactivenn.net.
author2 HENRY HEBERLE, ICMC/USP; GABRIELA VAZ MEIRELLES, Laboratório Nacional de Biociências, Campinas; FELIPE RODRIGUES DA SILVA, CNPTIA; GUILHERME P. TELLES, IC/Unicamp; ROSANE MINGHIM, ICMC/USP.
author_facet HENRY HEBERLE, ICMC/USP; GABRIELA VAZ MEIRELLES, Laboratório Nacional de Biociências, Campinas; FELIPE RODRIGUES DA SILVA, CNPTIA; GUILHERME P. TELLES, IC/Unicamp; ROSANE MINGHIM, ICMC/USP.
HEBERLE, H.
MEIRELLES, G. V.
SILVA, F. R. da
TELLES, G. P.
MINGHIM, R.
format Artigo de periódico
topic_facet Diagrama de Venn
Diagrama de Edwards-Venn
Venn diagram
Edwards-Venn diagram
Interaction
Set-unions
author HEBERLE, H.
MEIRELLES, G. V.
SILVA, F. R. da
TELLES, G. P.
MINGHIM, R.
author_sort HEBERLE, H.
title InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams.
title_short InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams.
title_full InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams.
title_fullStr InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams.
title_full_unstemmed InteractiVenn: a web-based tool for theanalysis of sets through Venn diagrams.
title_sort interactivenn: a web-based tool for theanalysis of sets through venn diagrams.
publishDate 2019-02-07
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1105705
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