Estimation of genetic structure of a Mycosphaerella musicola population using inter-simple sequence repeat markers.

Among the diseases affecting banana (Musa sp), yellow Sigatoka, caused by the fungal pathogen Mycosphaerella musicola Leach, is considered one of the most important in Brazil, causing losses throughout the year. Understanding the genetic structure of pathogen populations will provide insight into the life history of pathogens, including the evolutionary processes occurring in agrosystems. Tools for estimating the possible emergence of pathogen variants with altered pathogenicity, virulence, or aggressiveness, as well as resistance to systemic fungicides, can also be developed from such data. The objective of this study was to analyze the genetic diversity and population genetics of M. musicola in the main banana-producing regions in Brazil. A total of 83 isolates collected from different banana cultivars in the Brazilian states of Bahia, Rio Grande do Norte, and Minas Gerais were evaluated using inter-simple sequence repeat markers. High variability was detected between the isolates, and 85.5% of the haplotypes were singletons in the populations. The highest source of genetic diversity Genetic structure of M. musicola population 8047 Genetics and Molecular Research 14 (3): 8046-8057 (2015) ©FUNPEC-RP www.funpecrp.com.br (97.22%) was attributed to variations within populations. Bayesian cluster analysis revealed the presence of 2 probable ancestral groups, however, showed no relationship to population structure in terms of collection site, state of origin, or cultivar. Similarly, we detected noevidence of genetic recombination between individuals within different states, indicating that asexual cycles play a major role in M. musicola reproduction and that long-distance dispersal of the pathogen is the main factor contributing to the lack of population structure in the fungus.

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Main Authors: PEIXOUTO, Y. S., BRAGANÇA, C. A. D., ANDRADE, W. B., FERREIRA, C. F., HADDAD, F., OLIVEIRA, S. A. S. de, BRITO, F. S. D., MILLER, R. N. G., AMORIM, E. P.
Other Authors: Y. S. PEIXOUTO, UFRB; C. A. DÓREA BRAGANÇA; W. B. ANDRADE, UFRB; CLAUDIA FORTES FERREIRA, CNPMF; FERNANDO HADDAD, CNPMF; SAULO ALVES SANTOS DE OLIVEIRA, CNPMF; F. S. DAROSCI BRITO, UNB; R. N. G. MILLER, UNB; EDSON PERITO AMORIM, CNPMF.
Format: Separatas biblioteca
Language:English
eng
Published: 2015-10-28
Subjects:Marcado genético, Plant diseases., Doenlça de planta, Banana., Genetic markers.,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/1027411
http://dx.doi.org/10.4238/2015.July.17.13
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spelling dig-alice-doc-10274112017-08-16T03:03:54Z Estimation of genetic structure of a Mycosphaerella musicola population using inter-simple sequence repeat markers. PEIXOUTO, Y. S. BRAGANÇA, C. A. D. ANDRADE, W. B. FERREIRA, C. F. HADDAD, F. OLIVEIRA, S. A. S. de BRITO, F. S. D. MILLER, R. N. G. AMORIM, E. P. Y. S. PEIXOUTO, UFRB; C. A. DÓREA BRAGANÇA; W. B. ANDRADE, UFRB; CLAUDIA FORTES FERREIRA, CNPMF; FERNANDO HADDAD, CNPMF; SAULO ALVES SANTOS DE OLIVEIRA, CNPMF; F. S. DAROSCI BRITO, UNB; R. N. G. MILLER, UNB; EDSON PERITO AMORIM, CNPMF. Marcado genético Plant diseases. Doenlça de planta Banana. Genetic markers. Among the diseases affecting banana (Musa sp), yellow Sigatoka, caused by the fungal pathogen Mycosphaerella musicola Leach, is considered one of the most important in Brazil, causing losses throughout the year. Understanding the genetic structure of pathogen populations will provide insight into the life history of pathogens, including the evolutionary processes occurring in agrosystems. Tools for estimating the possible emergence of pathogen variants with altered pathogenicity, virulence, or aggressiveness, as well as resistance to systemic fungicides, can also be developed from such data. The objective of this study was to analyze the genetic diversity and population genetics of M. musicola in the main banana-producing regions in Brazil. A total of 83 isolates collected from different banana cultivars in the Brazilian states of Bahia, Rio Grande do Norte, and Minas Gerais were evaluated using inter-simple sequence repeat markers. High variability was detected between the isolates, and 85.5% of the haplotypes were singletons in the populations. The highest source of genetic diversity Genetic structure of M. musicola population 8047 Genetics and Molecular Research 14 (3): 8046-8057 (2015) ©FUNPEC-RP www.funpecrp.com.br (97.22%) was attributed to variations within populations. Bayesian cluster analysis revealed the presence of 2 probable ancestral groups, however, showed no relationship to population structure in terms of collection site, state of origin, or cultivar. Similarly, we detected noevidence of genetic recombination between individuals within different states, indicating that asexual cycles play a major role in M. musicola reproduction and that long-distance dispersal of the pathogen is the main factor contributing to the lack of population structure in the fungus. 2015-10-28T11:11:11Z 2015-10-28T11:11:11Z 2015-10-28 2015 2016-03-08T11:11:11Z Separatas Genetics and Molecular Research, v.14, n. 3, p. 8046-8057, 2015. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1027411 http://dx.doi.org/10.4238/2015.July.17.13 en eng openAccess
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language English
eng
topic Marcado genético
Plant diseases.
Doenlça de planta
Banana.
Genetic markers.
Marcado genético
Plant diseases.
Doenlça de planta
Banana.
Genetic markers.
spellingShingle Marcado genético
Plant diseases.
Doenlça de planta
Banana.
Genetic markers.
Marcado genético
Plant diseases.
Doenlça de planta
Banana.
Genetic markers.
PEIXOUTO, Y. S.
BRAGANÇA, C. A. D.
ANDRADE, W. B.
FERREIRA, C. F.
HADDAD, F.
OLIVEIRA, S. A. S. de
BRITO, F. S. D.
MILLER, R. N. G.
AMORIM, E. P.
Estimation of genetic structure of a Mycosphaerella musicola population using inter-simple sequence repeat markers.
description Among the diseases affecting banana (Musa sp), yellow Sigatoka, caused by the fungal pathogen Mycosphaerella musicola Leach, is considered one of the most important in Brazil, causing losses throughout the year. Understanding the genetic structure of pathogen populations will provide insight into the life history of pathogens, including the evolutionary processes occurring in agrosystems. Tools for estimating the possible emergence of pathogen variants with altered pathogenicity, virulence, or aggressiveness, as well as resistance to systemic fungicides, can also be developed from such data. The objective of this study was to analyze the genetic diversity and population genetics of M. musicola in the main banana-producing regions in Brazil. A total of 83 isolates collected from different banana cultivars in the Brazilian states of Bahia, Rio Grande do Norte, and Minas Gerais were evaluated using inter-simple sequence repeat markers. High variability was detected between the isolates, and 85.5% of the haplotypes were singletons in the populations. The highest source of genetic diversity Genetic structure of M. musicola population 8047 Genetics and Molecular Research 14 (3): 8046-8057 (2015) ©FUNPEC-RP www.funpecrp.com.br (97.22%) was attributed to variations within populations. Bayesian cluster analysis revealed the presence of 2 probable ancestral groups, however, showed no relationship to population structure in terms of collection site, state of origin, or cultivar. Similarly, we detected noevidence of genetic recombination between individuals within different states, indicating that asexual cycles play a major role in M. musicola reproduction and that long-distance dispersal of the pathogen is the main factor contributing to the lack of population structure in the fungus.
author2 Y. S. PEIXOUTO, UFRB; C. A. DÓREA BRAGANÇA; W. B. ANDRADE, UFRB; CLAUDIA FORTES FERREIRA, CNPMF; FERNANDO HADDAD, CNPMF; SAULO ALVES SANTOS DE OLIVEIRA, CNPMF; F. S. DAROSCI BRITO, UNB; R. N. G. MILLER, UNB; EDSON PERITO AMORIM, CNPMF.
author_facet Y. S. PEIXOUTO, UFRB; C. A. DÓREA BRAGANÇA; W. B. ANDRADE, UFRB; CLAUDIA FORTES FERREIRA, CNPMF; FERNANDO HADDAD, CNPMF; SAULO ALVES SANTOS DE OLIVEIRA, CNPMF; F. S. DAROSCI BRITO, UNB; R. N. G. MILLER, UNB; EDSON PERITO AMORIM, CNPMF.
PEIXOUTO, Y. S.
BRAGANÇA, C. A. D.
ANDRADE, W. B.
FERREIRA, C. F.
HADDAD, F.
OLIVEIRA, S. A. S. de
BRITO, F. S. D.
MILLER, R. N. G.
AMORIM, E. P.
format Separatas
topic_facet Marcado genético
Plant diseases.
Doenlça de planta
Banana.
Genetic markers.
author PEIXOUTO, Y. S.
BRAGANÇA, C. A. D.
ANDRADE, W. B.
FERREIRA, C. F.
HADDAD, F.
OLIVEIRA, S. A. S. de
BRITO, F. S. D.
MILLER, R. N. G.
AMORIM, E. P.
author_sort PEIXOUTO, Y. S.
title Estimation of genetic structure of a Mycosphaerella musicola population using inter-simple sequence repeat markers.
title_short Estimation of genetic structure of a Mycosphaerella musicola population using inter-simple sequence repeat markers.
title_full Estimation of genetic structure of a Mycosphaerella musicola population using inter-simple sequence repeat markers.
title_fullStr Estimation of genetic structure of a Mycosphaerella musicola population using inter-simple sequence repeat markers.
title_full_unstemmed Estimation of genetic structure of a Mycosphaerella musicola population using inter-simple sequence repeat markers.
title_sort estimation of genetic structure of a mycosphaerella musicola population using inter-simple sequence repeat markers.
publishDate 2015-10-28
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1027411
http://dx.doi.org/10.4238/2015.July.17.13
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