Analysis of genetic diversity in Theobroma cacao with emphasis on Witches' Broom Disease resistance

To facilitate the identification of Theobroma cacao L. that possess desirable traits to meet changing production and market conditions, there is a need to understand the genetic relationships among T. cacao germplasm. In addition, new cultivars are needed to provide more broadly based resistance to devastating diseases such as witches' broom disease [Crinipellis perniciosa (Stahel) Singer]. A subset of 270 T. cacao accessions based on (i) witches' broom disease resistance data, (ii) genetic characterization experiments, and (iii) a random sampling of recently acquired accessions was selected from the extensive germplasm collection at the Centro de Pesquisa do Cacau (CEPEC; Itabuna, Bahia, Brazil) in collaboration with Fazenda Almirante, a division of M&M Mars Incorporated in Itajuipe, Bahia, Brazil. Estimates of genetic distance based on random amplified polymorphic DNA (RAPD) markers were used to evaluate the genetic diversity among the selected accessions. Incorporation of recently acquired accessions (Accessions 181–270) did not increase the breadth of the distribution of genetic diversity already present within the “original” group sampled (Accessions 1–180) suggesting new accessions collected from already sampled geographic regions do not increase the existing genetic diversity in the germplasm collection. In addition, differences in RAPD marker frequencies were associated with accessions that had a high threshold of tolerance to witches' broom disease. Most accessions exhibiting tolerance to witches' broom disease were from the Upper Amazon region, with the exception of SGU 26, a hybrid from Guatemala. This suggests that the Upper Amazon is not the only region to have genes for resistance to witches' broom disease and stresses the need for further collection and examination of germplasm from other regions.

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Main Authors: 90465 Marita, J.M., 99309 Nienhuis, J., 105701 Pires, J.L., 40810 Aitken, W.M.
Format: biblioteca
Language:English
Published: EUA Wiley 2001
Subjects:THEOBROMA CACAO, PLANTACION, AGROFORESTERIA, VARIEDADES, GERMOPLASMA, VARIACION GENETICA, MARCADORES GENETICOS, RAPD, DISTRIBUCION GEOGRAFICA, ENFERMEDADES DE LAS PLANTAS, RESISTENCIA A LA ENFERMEDAD,
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id KOHA-OAI-BVE:127848
record_format koha
institution IICA
collection Koha
country Costa Rica
countrycode CR
component Bibliográfico
access En linea
Fisico
databasecode cat-sibiica
tag biblioteca
region America Central
libraryname Sistema de Bibliotecas IICA/CATIE
language English
topic THEOBROMA CACAO
PLANTACION
AGROFORESTERIA
VARIEDADES
GERMOPLASMA
VARIACION GENETICA
MARCADORES GENETICOS
RAPD
DISTRIBUCION GEOGRAFICA
ENFERMEDADES DE LAS PLANTAS
RESISTENCIA A LA ENFERMEDAD
THEOBROMA CACAO
PLANTACION
AGROFORESTERIA
VARIEDADES
GERMOPLASMA
VARIACION GENETICA
MARCADORES GENETICOS
RAPD
DISTRIBUCION GEOGRAFICA
ENFERMEDADES DE LAS PLANTAS
RESISTENCIA A LA ENFERMEDAD
spellingShingle THEOBROMA CACAO
PLANTACION
AGROFORESTERIA
VARIEDADES
GERMOPLASMA
VARIACION GENETICA
MARCADORES GENETICOS
RAPD
DISTRIBUCION GEOGRAFICA
ENFERMEDADES DE LAS PLANTAS
RESISTENCIA A LA ENFERMEDAD
THEOBROMA CACAO
PLANTACION
AGROFORESTERIA
VARIEDADES
GERMOPLASMA
VARIACION GENETICA
MARCADORES GENETICOS
RAPD
DISTRIBUCION GEOGRAFICA
ENFERMEDADES DE LAS PLANTAS
RESISTENCIA A LA ENFERMEDAD
90465 Marita, J.M.
99309 Nienhuis, J.
105701 Pires, J.L.
40810 Aitken, W.M.
Analysis of genetic diversity in Theobroma cacao with emphasis on Witches' Broom Disease resistance
description To facilitate the identification of Theobroma cacao L. that possess desirable traits to meet changing production and market conditions, there is a need to understand the genetic relationships among T. cacao germplasm. In addition, new cultivars are needed to provide more broadly based resistance to devastating diseases such as witches' broom disease [Crinipellis perniciosa (Stahel) Singer]. A subset of 270 T. cacao accessions based on (i) witches' broom disease resistance data, (ii) genetic characterization experiments, and (iii) a random sampling of recently acquired accessions was selected from the extensive germplasm collection at the Centro de Pesquisa do Cacau (CEPEC; Itabuna, Bahia, Brazil) in collaboration with Fazenda Almirante, a division of M&M Mars Incorporated in Itajuipe, Bahia, Brazil. Estimates of genetic distance based on random amplified polymorphic DNA (RAPD) markers were used to evaluate the genetic diversity among the selected accessions. Incorporation of recently acquired accessions (Accessions 181–270) did not increase the breadth of the distribution of genetic diversity already present within the “original” group sampled (Accessions 1–180) suggesting new accessions collected from already sampled geographic regions do not increase the existing genetic diversity in the germplasm collection. In addition, differences in RAPD marker frequencies were associated with accessions that had a high threshold of tolerance to witches' broom disease. Most accessions exhibiting tolerance to witches' broom disease were from the Upper Amazon region, with the exception of SGU 26, a hybrid from Guatemala. This suggests that the Upper Amazon is not the only region to have genes for resistance to witches' broom disease and stresses the need for further collection and examination of germplasm from other regions.
format
topic_facet THEOBROMA CACAO
PLANTACION
AGROFORESTERIA
VARIEDADES
GERMOPLASMA
VARIACION GENETICA
MARCADORES GENETICOS
RAPD
DISTRIBUCION GEOGRAFICA
ENFERMEDADES DE LAS PLANTAS
RESISTENCIA A LA ENFERMEDAD
author 90465 Marita, J.M.
99309 Nienhuis, J.
105701 Pires, J.L.
40810 Aitken, W.M.
author_facet 90465 Marita, J.M.
99309 Nienhuis, J.
105701 Pires, J.L.
40810 Aitken, W.M.
author_sort 90465 Marita, J.M.
title Analysis of genetic diversity in Theobroma cacao with emphasis on Witches' Broom Disease resistance
title_short Analysis of genetic diversity in Theobroma cacao with emphasis on Witches' Broom Disease resistance
title_full Analysis of genetic diversity in Theobroma cacao with emphasis on Witches' Broom Disease resistance
title_fullStr Analysis of genetic diversity in Theobroma cacao with emphasis on Witches' Broom Disease resistance
title_full_unstemmed Analysis of genetic diversity in Theobroma cacao with emphasis on Witches' Broom Disease resistance
title_sort analysis of genetic diversity in theobroma cacao with emphasis on witches' broom disease resistance
publisher EUA Wiley
publishDate 2001
work_keys_str_mv AT 90465maritajm analysisofgeneticdiversityintheobromacacaowithemphasisonwitchesbroomdiseaseresistance
AT 99309nienhuisj analysisofgeneticdiversityintheobromacacaowithemphasisonwitchesbroomdiseaseresistance
AT 105701piresjl analysisofgeneticdiversityintheobromacacaowithemphasisonwitchesbroomdiseaseresistance
AT 40810aitkenwm analysisofgeneticdiversityintheobromacacaowithemphasisonwitchesbroomdiseaseresistance
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spelling KOHA-OAI-BVE:1278482022-08-04T22:02:51ZAnalysis of genetic diversity in Theobroma cacao with emphasis on Witches' Broom Disease resistance 90465 Marita, J.M. 99309 Nienhuis, J. 105701 Pires, J.L. 40810 Aitken, W.M. EUA Wiley2001 enpdfTo facilitate the identification of Theobroma cacao L. that possess desirable traits to meet changing production and market conditions, there is a need to understand the genetic relationships among T. cacao germplasm. In addition, new cultivars are needed to provide more broadly based resistance to devastating diseases such as witches' broom disease [Crinipellis perniciosa (Stahel) Singer]. A subset of 270 T. cacao accessions based on (i) witches' broom disease resistance data, (ii) genetic characterization experiments, and (iii) a random sampling of recently acquired accessions was selected from the extensive germplasm collection at the Centro de Pesquisa do Cacau (CEPEC; Itabuna, Bahia, Brazil) in collaboration with Fazenda Almirante, a division of M&M Mars Incorporated in Itajuipe, Bahia, Brazil. Estimates of genetic distance based on random amplified polymorphic DNA (RAPD) markers were used to evaluate the genetic diversity among the selected accessions. Incorporation of recently acquired accessions (Accessions 181–270) did not increase the breadth of the distribution of genetic diversity already present within the “original” group sampled (Accessions 1–180) suggesting new accessions collected from already sampled geographic regions do not increase the existing genetic diversity in the germplasm collection. In addition, differences in RAPD marker frequencies were associated with accessions that had a high threshold of tolerance to witches' broom disease. Most accessions exhibiting tolerance to witches' broom disease were from the Upper Amazon region, with the exception of SGU 26, a hybrid from Guatemala. This suggests that the Upper Amazon is not the only region to have genes for resistance to witches' broom disease and stresses the need for further collection and examination of germplasm from other regions. Incluye 39 referencias bibliográficas en las páginas 1315-1316To facilitate the identification of Theobroma cacao L. that possess desirable traits to meet changing production and market conditions, there is a need to understand the genetic relationships among T. cacao germplasm. In addition, new cultivars are needed to provide more broadly based resistance to devastating diseases such as witches' broom disease [Crinipellis perniciosa (Stahel) Singer]. A subset of 270 T. cacao accessions based on (i) witches' broom disease resistance data, (ii) genetic characterization experiments, and (iii) a random sampling of recently acquired accessions was selected from the extensive germplasm collection at the Centro de Pesquisa do Cacau (CEPEC; Itabuna, Bahia, Brazil) in collaboration with Fazenda Almirante, a division of M&M Mars Incorporated in Itajuipe, Bahia, Brazil. Estimates of genetic distance based on random amplified polymorphic DNA (RAPD) markers were used to evaluate the genetic diversity among the selected accessions. Incorporation of recently acquired accessions (Accessions 181–270) did not increase the breadth of the distribution of genetic diversity already present within the “original” group sampled (Accessions 1–180) suggesting new accessions collected from already sampled geographic regions do not increase the existing genetic diversity in the germplasm collection. In addition, differences in RAPD marker frequencies were associated with accessions that had a high threshold of tolerance to witches' broom disease. Most accessions exhibiting tolerance to witches' broom disease were from the Upper Amazon region, with the exception of SGU 26, a hybrid from Guatemala. This suggests that the Upper Amazon is not the only region to have genes for resistance to witches' broom disease and stresses the need for further collection and examination of germplasm from other regions. THEOBROMA CACAOPLANTACIONAGROFORESTERIAVARIEDADESGERMOPLASMAVARIACION GENETICAMARCADORES GENETICOSRAPDDISTRIBUCION GEOGRAFICAENFERMEDADES DE LAS PLANTASRESISTENCIA A LA ENFERMEDADCrop Science (EUA) https://doi.org/10.2135/cropsci2001.4141305x