Impact of AlphaFold on structure prediction of protein complexes: The CASP15-CAPRI experiment

por Lensink, Marc F., Brysbaert, Guillaume, Raouraoua, Nessim, Bates, Paul A., Giulini, Marco, Honorato, Rodrigo V., van Noort, Charlotte, Teixeira, Joao M. C., Bonvin, Alexandre M. J. J., Kong, Ren, Shi, Hang, Samsonov, Sergey A., Slusarz, Rafal, Zieba, Karolina, Sieradzan, Adam K., Czaplewski, Cezary, Kobayashi, Shinpei, Miyakawa, Yuta, Kiyota, Yasuomi, Takeda-Shitaka, Mayuko, Olechnovic, Kliment, Wallner, Bjorn, Valancauskas, Lukas, Dapkunas, Justas, Venclovas, Ceslovas, Yang, Lin, Hou, Chengyu, He, Xiaodong, Guo, Shuai, Jiang, Shenda, Ma, Xiaoliang, Duan, Rui, Qui, Liming, Xu, Xianjin, Lu, Xufeng, Zou, Xiaoqin, Velankar, Sameer, Wodak, Shoshana J., Chang, Shan, Liu, Jian, Guo, Zhiye, Chen, Xiao, Morehead, Alex, Roy, Raj S., Wu, Tianqi, Giri, Nabin, Quadir, Farhan, Chen, Chen, Cheng, Jianlin, Del Carpio, Carlos A., Ichiishi, Eichiro, Rodríguez-Lumbreras, Luis A., Fernández-Recio, Juan, Harmalkar, Ameya, Chu, Lee-Shin, Canner, Sam, Smanta, Rituparna, Gray, Jeffrey J., Li, Hao, Lin, Peicong, He, Jiahua, Tao, Huanyu, Huang, Sheng-You, Roel-Touris, Jorge, Jimenez-Garcia, Brian, Christoffer, Charles W., Jain, Anika J., Kagaya, Yuki, Kannan, Harini, Nakamura, Tsukasa, Terashi, Genki, Verburgt, Jacob C., Zhang, Yuanyuan, Zhang, Zicong, Fujuta, Hayato, Sekijima, Masakazu, Kihara, Daisuke, Khan, Omeir, Kotelnikov, Sergei, Ghani, Usman, Padhorny, Dzmitry, Beglov, Dmitri, Vajda, Sandor, Kozakov, Dima, Negi, Surendra S., Ricciardelli, Tiziana, Barradas-Bautista, Didier, Cao, Zhen, Chawla, Mohit, Cavallo, Luigi, Oliva, Romina, Yin, Rui, Cheung, Melyssa, Guest, Johnathan D., Lee, Jessica, Pierce, Brian G., Shor, Ben, Cohen, Tomer, Halfon, Matan, Schneidman-Duhovny, Dina, Zhu, Shaowen, Yin, Rujie, Sun, Yuanfei, Shen, Yang, Maszota-Zieleniak, Martyna, Bojarski, Krzysztof K., Lubecka, Emilia A., Marcisz, Mateusz, Danielsson, Annemarie, Dziadek, Lukasz, Gaardlos, Margrethe, Gieldon, Artur, Liwo, Adam
Publicado 2023-12

Correction to: 2021 Taxonomic update of phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

por Kuhn, Jens H., Adkins, Scott, Agwanda, Bernard R., Al Kubrusli, Rim, Alkhovsky, Sergey V., Amarasinghe, Gaya K., Avšič-Županc, Tatjana, Ayllón, María A., Bahl, Justin, Balkema-Buschmann, Anne, Ballinger, Matthew J., Basler, Christopher F., Bavari, Sina, Beer, Martin, Bejerman, Nicolas, Bennett, Andrew J., Bente, Dennis A., Bergeron, Éric, Bird, Brian H., Blair, Carol D., Blasdell, Kim R., Blystad, Dag-Ragnar, Bojko, Jamie, Borth, Wayne B., Bradfute, Steven, Breyta, Rachel, Briese, Thomas, Brown, Paul A., Brown, Judith K., Buchholz, Ursula J., Buchmeier, Michael J., Bukreyev, Alexander, Burt, Felicity, Büttner, Carmen, Calisher, Charles H., Cao, Mengji, Casas, Inmaculada, Chandran, Kartik, Charrel, Rémi N., Cheng, Qi, Chiaki, Yuya, Chiapello, Marco, Choi, Il-Ryong, Ciuffo, Marina, Clegg, J Christopher S., Crozier, Ian, Dal Bó, Elena, de la Torre, Juan Carlos, de Lamballerie, Xavier, de Swart, Rik L., Debat, Humberto, Dheilly, Nolwenn M., Di Cicco, Emiliano, Di Paola, Nicholas, Di Serio, Francesco, Dietzgen, Ralf G., Digiaro, Michele, Dolnik, Olga, Drebot, Michael A., Drexler, J Felix, Dundon, William G., Duprex, W Paul, Dürrwald, Ralf, Dye, John M., Easton, Andrew J., Ebihara, Hideki, Elbeaino, Toufic, Ergünay, Koray, Ferguson, Hugh W., Fooks, Anthony R., Forgia, Marco, Formenty, Pierre B.H., Fránová, Jana, Freitas-Astúa, Juliana, Fu, Jingjing, Fürl, Stephanie, Gago-Zachert, Selma, Gāo, George Fú, García, María Laura, García-Sastre, Adolfo, Garrison, Aura R., Gaskin, Thomas, Gonzalez, Jean-Paul J., Griffiths, Anthony, Goldberg, Tony L., Groschup, Martin H., Günther, Stephan, Hall, Roy A., Hammond, John, Han, Tong, Hepojoki, Jussi, Hewson, Roger, Hong, Jiang, Hong, Ni, Hongo, Seiji, Horie, Masayuki, Hu, John S., Hu, Tao, Hughes, Holly R., Hüttner, Florian, Hyndman, Timothy H., Ilyas, M., Jalkanen, Risto, Jiāng, Dàohóng, Jonson, Gilda B., Junglen, Sandra, Kadono, Fujio, Kaukinen, Karia H., Kawate, Michael, Klempa, Boris, Klingström, Jonas, Kobinger, Gary, Koloniuk, Igor, Kondō, Hideki, Koonin, Eugene V., Krupovic, Mart, Kubota, Kenji, Kurath, Gael, Laenen, Lies, Lambert, Amy J., Langevin, Stanley L., Lee, Benhur, Lefkowitz, Elliot J., Leroy, Eric M., Li, Shaorong, Li, Longhui, Lǐ, Jiànróng, Liu, Huazhen, Lukashevich, Igor S., Maes, Piet, de Souza, William Marciel, Marklewitz, Marco, Marshall, Sergio H., Marzano, Shin-Yi L., Massart, Sebastien, McCauley, John W., Melzer, Michael, Mielke-Ehret, Nicole, Miller, Kristina M., Ming, Tobi J., Mirazimi, Ali, Mordecai, Gideon J., Mühlbach, Hans-Peter, Mühlberger, Elke, Naidu, Rayapati, Natsuaki, Tomohide, Navarro, José A., Netesov, Sergey V., Neumann, Gabriele, Nowotny, Norbert, Nunes, Márcio R.T., Olmedo-Velarde, Alejandro, Palacios, Gustavo, Pallás, Vicente, Pályi, Bernadett, Papa, Anna, Paraskevopoulou, Sofia, Park, Adam C., Parrish, Colin R., Patterson, David A., Pauvolid-Corrêa, Alex, Pawęska, Janusz T., Payne, Susan, Peracchio, Carlotta, Pérez, Daniel R., Postler, Thomas S., Qi, Liying, Radoshitzky, Sheli R., Resende, Renato O., Reyes, Carina A., Rima, Bertus K., Luna, Gabriel Robles, Romanowski, Víctor, Rota, Paul, Rubbenstroth, Dennis, Rubino, Luisa, Runstadler, Jonathan A., Sabanadzovic, Sead, Sall, Amadou Alpha, Salvato, Maria S., Sang, Rosemary, Sasaya, Takahide, Schulze, Angela D., Schwemmle, Martin, Shi, Mang, Shí, Xiǎohóng, Shí, Zhènglì, Shimomoto, Yoshifumi, Shirako, Yukio, Siddell, Stuart G., Simmonds, Peter, Sironi, Manuela, Smagghe, Guy, Smither, Sophie, Song, Jin-Won, Spann, Kirsten, Spengler, Jessica R., Stenglein, Mark D., Stone, David M., Sugano, Jari, Suttle, Curtis A., Tabata, Amy, Takada, Ayato, Takeuchi, Shigeharu, Tchouassi, David P., Teffer, Amy, Tesh, Robert B., Thornburg, Natalie J., Tomitaka, Yasuhiro, Tomonaga, Keizō, Tordo, Noël, Torto, Baldwyn, Towner, Jonathan S., Tsuda, Shinya, Tu, Changchun, Turina, Massimo, Tzanetakis, Ioannis E., Uchida, Janice, Usugi, Tomio, Vaira, Anna Maria, Vallino, Marta, van den Hoogen, Bernadette, Varsani, Arvind, Vasilakis, Nikos, Verbeek, Martin, von Bargen, Susanne, Wada, Jiro, Wahl, Victoria, Walker, Peter J., Wang, Lin-Fa, Wang, Guoping, Wang, Yanxiang, Wang, Yaqin, Waqas, Muhammad, Wèi, Tàiyún, Wen, Shaohua, Whitfield, Anna E., Williams, John V., Wolf, Yuri I, Wu, Jiangxiang, Xu, Lei, Yanagisawa, Hironobu, Yang, Caixia, Yang, Zuokun, Zerbini, F Murilo, Zhai, Lifeng, Zhang, Yong-Zhen, Zhang, Song, Zhang, Jinguo, Zhang, Zhe, Zhou, Xueping
Publicado 2021-11-17

Mapping genomic loci implicates genes and synaptic biology in schizophrenia

por Trubetskoy, Vassily, Pardiñas, Antonio F., Qi, Ting, Panagiotaropoulou, Georgia, Awasthi, Swapnil, Bigdeli, Tim B., Bryois, Julien, Chen, Chia-Yen, Dennison, Charlotte A., Hall, Lynsey S., Lam, Max, Keller, Matthew C., Kelly, Brian J.., Khrunin, Andrey, Kim, Sung-Wan, Klovins, Janis, Wang, Shi-Heng, Harwood, Janet, Kondratiev, Nikolay, O'Neill, F Anthony, Athanasiu, Lavinia, Bobes, Julio, Green, Michael F., Konte, Bettina, Kraft, Julia, Kubo, Michiaki, Kučinskas, Vaidutis, Kučinskiene, Zita Ausrele, Kusumawardhani, Agung, Xu, Shuhua, Kuzelova-Ptackova, Hana, Landi, Stefano, Bonassi, Stefano, Suvisaari, Jaana, Lazzeroni, Laura C., Koopmans, Frank, Torretta, Silvia, Oh, Sang-Yun, Lee, Phil H., Legge, Sophie E., Lehrer, Douglas S., Lencer, Rebecca, Adolfsson, Rolf, Braun, Alice, Lerer, Bernard, Nordentoft, Merete, Li, Miaoxin, Lieberman, Jeffrey, Light, Gregory A., Limborska, Svetlana, Tosato, Sarah, Liu, Chih-Min, Olincy, Ann, Magnusson, Sigurdur, Bressan, Rodrigo Affonseca, Lönnqvist, Jouko, Gutiérrez, Blanca, Harvey, Carol, Loughland, Carmel M., Lubinski, Jan, Luykx, Jurjen J., Lynham, Amy, Macek, Milan, Mackinnon, Andrew, Tura, Gian Battista, Bromet, Evelyn J., Magnusson, Patrik K. E., Maher, Brion S., Ota, Vanessa Kiyomi, Paciga, Sara A., Arango, Celso, Maier, Wolfgang, Richards, Alexander L., Malaspina, Dolores, Mallet, Jacques, Marder, Stephen R., Takahashi, Atsushi, Marsal, Sara, Martin, Alicia R., Turetsky, Bruce I., Martorell, Lourdes, Palotie, Aarno, Mattheisen, Manuel, Baune, Bernhard T., McCarley, Robert W., Giusti-Rodríguez, Paola, McDonald, Colm, Bruggeman, Richard, McGrath, John J., Sidorenko, Julia, Medeiros, Helena, Pantelis, Christos, Grove, Jakob, Pato, Carlos N., Üçok, Alp, Papadimitriou, George N., Straub, Richard E., Parellada, Mara, Buckley, Peter F., Paunio, Tiina, Pellegrino, Renata, Periyasamy, Sathish, Perkins, Diana O., Pfuhlmann, Bruno, Pietiläinen, Olli, Qin, Shengying, Godard, Stephanie, Pimm, Jonathan, Vaaler, Arne, Ikeda, Masashi, Wu, Yang, Porteous, David, Kim, Minsoo, Powell, John, Quattrone, Diego, Quested, Digby, Radant, Allen D., Rietschel, Marcella, Rampino, Antonio, Rapaport, Mark H., Smoller, Jordan W., Rautanen, Anna, Goldstein, Jacqueline I., Belangero, Sintia Iole, van Amelsvoort, Therese, Reichenberg, Abraham, Roe, Cheryl, Roffman, Joshua L., Li, Zhiqiang, Riley, Brien P., Roth, Julian, Morgan, Vera A., Rothermundt, Matthias, Rutten, Bart P. F., Saker-Delye, Safaa, Salomaa, Veikko, Børglum, Anders D., Sanjuan, Julio, van Winkel, Ruud, González Peñas, Javier, Santoro, Marcos Leite, Morley, Christopher P., Zeng, Jian, Savitz, Adam, Schall, Ulrich, Scott, Rodney J., Voloudakis, Georgios, Seidman, Larry J., Sharp, Sally Isabel, Alptekin, Köksal, Shi, Jianxin, Siever, Larry J., Atkinson, Elizabeth G., Buckner, Randy L., Rivera, Margarita, Sigurdsson, Engilbert, González-Pinto, Ana, Sim, Kang, Skarabis, Nora, Slominsky, Petr, So, Hon-Cheong, Sobell, Janet L., Braff, David, Zhang, Wen, Bybjerg-Grauholm, Jonas, Söderman, Erik, Rujescu, Dan, Stain, Helen J., Melle, Ingrid, Steen, Nils Eiel, Steixner-Kumar, Agnes A., Gopal, Srihari, Stögmann, Elisabeth, Veijola, Juha, Watanabe, Kyoko, Cahn, Wiepke, Bramon, Elvira, Waddington, John, Pato, Michele T., Walter, Henrik, Waterreus, Anna, Webb, Bradley T., Weiser, Mark, Williams, Nigel M., Witt, Stephanie H., Wormley, Brandon K., Cairns, Murray J., Mesholam-Gately, Raquelle I., Wu, Jing Qin, Buxbaum, Joseph D., Gratten, Jacob, Agerbo, Esben, Greenwood, Tiffany A., Xu, Zhida, Yolken, Robert, Zai, Clement C., Zhou, Wei, Calkins, Monica E., Zhu, Feng, Zimprich, Fritz, Atbaşoğlu, Eşref Cem, Metspalu, Andres, Saka, Meram C., Campion, Dominique, Ayub, Muhammad, Benner, Christian, Bertolino, Alessandro, Guillin, Olivier, Carr, Vaughan J, Al Eissa, Mariam, Black, Donald W., Bray, Nicholas J., Breen, Gerome, Buccola, Nancy G., Sanders, Alan R., Byerley, William F., Cervilla, Jorge A., Michie, Patricia T., Chen, Wei J., Terao, Chikashi, Cloninger, C. Robert, Crespo-Facorro, Benedicto, Donohoe, Gary, Gülöksüz, Sinan, Freedman, Robert, Albus, Margot, Hayward, Caroline, Galletly, Cherrie, Gandal, Michael J., Hahn, Eric, Castle, David, Gennarelli, Massimo, Milani, Lili, Hougaard, David M., Hwu, Hai-Gwo, Jablensky, Assen V., McCarroll, Steven A., Moran, Jennifer L., Azevedo, Maria Helena, Gur, Rachel E., Mors, Ole, Catts, Stanley V., Mortensen, Preben B., Streit, Fabian, Alexander, Madeline, Müller-Myhsok, Bertram, Milanova, Vihra, Neil, Amanda L., Cichon, Sven, Giannitelli, Marianna, Schwab, Sibylle G., Collier, David A., Morris, Derek W., Corvin, Aiden, Curtis, David, Forti, Marta Di, Als, Thomas D., Domenici, Enrico, Ehrenreich, Hannelore, Escott-Price, Valentina, Strengman, Eric, Esko, Tõnu, Serretti, Alessandro, Mitjans, Marina, Hakonarson, Hakon, Molden, Espen, Fanous, Ayman H., Gareeva, Anna, Gawlik, Micha, Gejman, Pablo V., Gill, Michael, Glatt, Stephen J., Amin, Farooq, Stroup, T Scott, Chambert, Kimberley D., Sham, Pak C., Golimbet, Vera, Hong, Kyung Sue, Hultman, Christina M., Molina, Esther, Haroutunian, Vahram, Hyman, Steven E., Iwata, Nakao, Jönsson, Erik G., Kahn, René S., Chan, Raymond C. K., Kennedy, James L., Shi, Yongyong, Adams, Mark, Khusnutdinova, Elza, Kirov, George, Arolt, Volker, Knowles, James A., Moltó, Maria Dolores, Krebs, Marie-Odile, Hartmann, Annette M., Nestadt, Gerald, Laurent-Levinson, Claudine, Lee, Jimmy, Muntané, Gerard, Lencz, Todd, Subramaniam, Mythily, Levinson, Douglas F., Li, Qingqin S., Liu, Jianjun, Malhotra, Anil K., Malhotra, Dheeraj, Iyegbe, Conrad, Mondelli, Valeria, Arrojo, Manuel, McIntosh, Andrew M., Petryshen, Tracey L., Frei, Oleksandr, McQuillin, Andrew, Sugar, Catherine A., Menezes, Paulo R., St Clair, David, Meier, Sandra, Chaumette, Boris, Stefansson, Hreinn, Stefansson, Kari, Tsuang, Ming T., van Os, Jim, Henskens, Frans A., Vawter, Marquis P., Bacanu, Silviu A., Weinberger, Daniel R., Pirinen, Matti, Werge, Thomas, Cheng, Wei, Murphy, Kieran C., Svrakic, Dragan M., Wildenauer, Dieter B., Yu, Xin, Yue, Weihua, Holmans, Peter A., Pocklington, Andrew J., Roussos, Panos, Herms, Stefan, Pulver, Ann E., Cheung, Eric F. C., Vassos, Evangelos, Verhage, Matthijs, Bass, Nicholas J., Swerdlow, Neal R., Myin-Germeys, Inez, Visscher, Peter M., Yang, Jian, Posthuma, Danielle, Andreassen, Ole A., Kendler, Kenneth S., Chong, Siow Ann, Gur, Ruben C., Owen, Michael J., Wray, Naomi R., Hoffmann, Per, Daly, Mark J., Szatkiewicz, Jin P., Huang, Hailiang, Nenadić, Igor, Neale, Benjamin M., Begemann, Martin, Thibaut, Florence, Sullivan, Patrick F., Schulze, Thomas G., Ripke, Stephan, Walters, James T. R., O'Donovan, Michael C., Belliveau, Richard A., Bene, Judit, Ta, Thi Minh Tam, Howrigan, Daniel P., Benyamin, Beben, Mowry, Bryan J., Giegling, Ina, Bergen, Sarah E., Silverman, Jeremy M., Blasi, Giuseppe, Cohen, David, Stone, William S., Consoli, Angèle, Cordeiro, Quirino, Costas, Javier, Curtis, Charles, Nikitina-Zake, Liene, Davidson, Michael, Joa, Inge, Davis, Kenneth L., Murray, Robin M., de Haan, Lieuwe, Agartz, Ingrid, Alizadeh, Behrooz Z., Degenhardt, Franziska, DeLisi, Lynn E., Demontis, Ditte, Dickerson, Faith, Dikeos, Dimitris, Dinan, Timothy, Noto, Cristiano, Nimgaonkar, Vishwajit, Djurovic, Srdjan, Duan, Jubao, Julià, Antonio, Stahl, Eli A., Toncheva, Draga, Ducci, Giuseppe, Dudbridge, Frank, Eriksson, Johan G., Fañanas Saura. Lourdes, Faraone, Stephen V., Moreno, Carmen, Fiorentino, Alessia, Forstner, Andreas, Nuechterlein, Keith H., Frank, Josef, Tsuang, Debby W., Freimer, Nelson B., Tooney, Paul A., Fromer, Menachem, Ge,Tian, Frustaci, Alessandra, Nöthen, Markus M., Gadelha, Ary, Genovese, Giulio, Gershon, Elliot S., Kähler, Anna K., Kam-Thong, Tony, Vilella, Elisabet, O'Brien, Niamh Louise, Kamatani, Yoichiro, Melegh, Bela, Karachanak-Yankova, Sena, Ophoff, Roel A., Kebir, Oussama
Publicado 2022-04

Genome annotation of the flat mite Brevipalpus yothersi Baker (Tenuipalpidae).

por NOVELLI, V. M., NUNES, M. A., MENDONÇA, R. S. de, FREITAS ASTUA, J., SINICO, T. E., LIN, Y. C., LE, P., VAN DE PEER, Y., NAVIA, D.
Publicado 2017-02-06

Draft genome assembly of the false spider mite.

por NAVIA, D., NOVELLI, V. M., ROMBAUTS, S., FREITAS-ASTUA, J., MENDONÇA, R. S. de, NUNES, M. A., MACHADO, M. A., LIN, Y.-C., LE, P., ZHANG, Z., GRBIC, M., WYBOUW, N., BREEUWER, J. A. J., LEEUWEN, T. V., PEER, Y. V. de
Publicado 2019-09-19

Whole-genome resequencing of worldwide wild and domestic sheep Eeucidates genetic diversity, introgression, and agronomically important loci.

por LV, F.-H., CAO, Y.-H., LIU, G.-J., LUO, L.-Y., LU, R., LIU, M.-J., LI, W.-R., ZHOU, P., WANG, X.-H., SHEN, M., GAO, L., YANG, J.-Q., YANG, H., YANG, Y.-L., LIU, C.-B., WAN, P.-C., ZHANG, Y.-S., PI, W.-H., REN, Y.-L., SHEN, Z.-Q., WANG, F., WANG, Y.-T., LI, J. Q., SALEHIAN-DEHKORDI, H., HEHUA, E., LIU, Y.-G., CHEN, J.-F., WANG, J.-K., DENG, X.-M., ESMAILIZADEH, A., DEHGHANI-QANATQESTANI, M., CHARATI, H., NOSRATI, M., STEPANEK, O., RUSHDI, H. E., OLSAKER, I., CURIK, I., GORKHALI, N. A., PAIVA, S. R., CAETANO, A. R., CIANI, E., AMILLS, M., WEIMANN, C., ERHARDT, G., AMANE, A., MWACHARO, J. M., HAN, J.-L., HANOTTE, O., PERIASAMY, K., JOHANSSON, A. M., HALLSSON, J. H., KANTANEN, J., COLTMAN, D. W., BRUFORD, M. W., LENSTRA, J. A., LI, M.-H.
Publicado 2022-03-28